Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H2AQ7L7L0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HIST3H2AQ7L7L0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST3H2AQ7L7L0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
HIST3H2AQ7L7L0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST3H2AQ7L7L0 AL353803.4-201ENST00000565882 1934 ntBASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 AC009299.2-201ENST00000482477 511 ntBASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
HIST3H2AQ7L7L0 AC144652.1-201ENST00000609974 1624 ntBASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST3H2AQ7L7L0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 TSPY9P-201ENST00000440215 945 ntBASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 TSPY11P-201ENST00000442607 1045 ntBASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 AC010997.5-201ENST00000609182 354 ntBASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST3H2AQ7L7L0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIST3H2AQ7L7L0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
HIST3H2AQ7L7L0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HIST3H2AQ7L7L0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 AL451085.2-201ENST00000605085 799 ntBASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.13■□□□□ 0.81
HIST3H2AQ7L7L0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 C1orf229-201ENST00000623686 2258 ntBASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.12■□□□□ 0.81
HIST3H2AQ7L7L0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 FP325331.1-202ENST00000623531 1380 ntBASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HIST3H2AQ7L7L0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms