Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 C17orf82-201ENST00000623772 1530 ntBASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 C1orf229-201ENST00000623686 2258 ntBASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HIST2H3AQ71DI3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HIST2H3AQ71DI3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 KRT16P3-201ENST00000439127 1283 ntBASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HIST2H3AQ71DI3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HIST2H3AQ71DI3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HIST2H3AQ71DI3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HIST2H3AQ71DI3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.43■□□□□ 0.7
HIST2H3AQ71DI3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HIST2H3AQ71DI3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.41■□□□□ 0.7
HIST2H3AQ71DI3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HIST2H3AQ71DI3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms