Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SHISA2Q6UWI4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 KRT19P1-201ENST00000405746 1186 ntBASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SHISA2Q6UWI4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 GPX1P1-201ENST00000388829 606 ntBASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 KRT18P11-201ENST00000435214 1283 ntBASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 CROCCP5-201ENST00000436658 830 ntBASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 ALDH1A3-203ENST00000557963 1670 ntBASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHISA2Q6UWI4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 DUX4L4-201ENST00000566884 1269 ntBASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 AC066615.1-201ENST00000640911 628 ntBASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 SLC6A10P-202ENST00000431994 2058 ntBASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.3■□□□□ 0.36
SHISA2Q6UWI4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.29■□□□□ 0.36
SHISA2Q6UWI4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 KRT18P61-201ENST00000585825 1298 ntBASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 AP004607.4-201ENST00000530158 1459 ntBASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SHISA2Q6UWI4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHISA2Q6UWI4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SHISA2Q6UWI4 FP325331.1-202ENST00000623531 1380 ntBASIC17.27■□□□□ 0.35
SHISA2Q6UWI4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHISA2Q6UWI4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHISA2Q6UWI4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SHISA2Q6UWI4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms