Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf88Q6PI97 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf88Q6PI97 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf88Q6PI97 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C11orf88Q6PI97 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
C11orf88Q6PI97 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 ANOS2P-203ENST00000472227 1816 ntBASIC19.18■□□□□ 0.66
C11orf88Q6PI97 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 MIR4508-201ENST00000584178 70 ntBASIC19.18■□□□□ 0.66
C11orf88Q6PI97 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 AC019171.1-201ENST00000601251 1056 ntBASIC19.18■□□□□ 0.66
C11orf88Q6PI97 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.18■□□□□ 0.66
C11orf88Q6PI97 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
C11orf88Q6PI97 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 AL137060.1-201ENST00000618151 2648 ntBASIC19.16■□□□□ 0.66
C11orf88Q6PI97 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
C11orf88Q6PI97 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 DUSP8P3-201ENST00000399571 1760 ntBASIC19.15■□□□□ 0.66
C11orf88Q6PI97 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 AL451085.2-201ENST00000605085 799 ntBASIC19.15■□□□□ 0.66
C11orf88Q6PI97 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C11orf88Q6PI97 SLC25A24-204ENST00000569674 2357 ntBASIC19.14■□□□□ 0.66
C11orf88Q6PI97 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
C11orf88Q6PI97 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.14■□□□□ 0.65
C11orf88Q6PI97 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.13■□□□□ 0.65
C11orf88Q6PI97 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms