Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.48■■□□□ 1.83
CTR9Q6PD62 BX842568.3-201ENST00000418104 571 ntBASIC26.48■■□□□ 1.83
CTR9Q6PD62 AC233992.3-201ENST00000607491 485 ntBASIC26.48■■□□□ 1.83
CTR9Q6PD62 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.48■■□□□ 1.83
CTR9Q6PD62 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.47■■□□□ 1.83
CTR9Q6PD62 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
CTR9Q6PD62 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.47■■□□□ 1.83
CTR9Q6PD62 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.47■■□□□ 1.83
CTR9Q6PD62 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CTR9Q6PD62 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
CTR9Q6PD62 SLC47A1P1-202ENST00000449666 945 ntBASIC26.46■■□□□ 1.83
CTR9Q6PD62 AC105265.2-201ENST00000467189 838 ntBASIC26.46■■□□□ 1.83
CTR9Q6PD62 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.46■■□□□ 1.83
CTR9Q6PD62 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CTR9Q6PD62 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
CTR9Q6PD62 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CTR9Q6PD62 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CTR9Q6PD62 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.45■■□□□ 1.83
CTR9Q6PD62 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
CTR9Q6PD62 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CTR9Q6PD62 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CTR9Q6PD62 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.45■■□□□ 1.82
CTR9Q6PD62 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.44■■□□□ 1.82
CTR9Q6PD62 ANOS2P-203ENST00000472227 1816 ntBASIC26.44■■□□□ 1.82
CTR9Q6PD62 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CTR9Q6PD62 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.44■■□□□ 1.82
CTR9Q6PD62 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
CTR9Q6PD62 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.44■■□□□ 1.82
CTR9Q6PD62 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CTR9Q6PD62 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CTR9Q6PD62 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.43■■□□□ 1.82
CTR9Q6PD62 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
CTR9Q6PD62 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CTR9Q6PD62 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.43■■□□□ 1.82
CTR9Q6PD62 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CTR9Q6PD62 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CTR9Q6PD62 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CTR9Q6PD62 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CTR9Q6PD62 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CTR9Q6PD62 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.42■■□□□ 1.82
CTR9Q6PD62 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CTR9Q6PD62 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CTR9Q6PD62 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CTR9Q6PD62 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.42■■□□□ 1.82
CTR9Q6PD62 MIR935-201ENST00000401179 91 ntBASIC26.42■■□□□ 1.82
CTR9Q6PD62 AC010525.1-201ENST00000585559 441 ntBASIC26.42■■□□□ 1.82
CTR9Q6PD62 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.42■■□□□ 1.82
CTR9Q6PD62 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.41■■□□□ 1.82
CTR9Q6PD62 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CTR9Q6PD62 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CTR9Q6PD62 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
CTR9Q6PD62 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.41■■□□□ 1.82
CTR9Q6PD62 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CTR9Q6PD62 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CTR9Q6PD62 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CTR9Q6PD62 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
CTR9Q6PD62 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.4■■□□□ 1.82
CTR9Q6PD62 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
CTR9Q6PD62 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CTR9Q6PD62 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CTR9Q6PD62 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.4■■□□□ 1.82
CTR9Q6PD62 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CTR9Q6PD62 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CTR9Q6PD62 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CTR9Q6PD62 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CTR9Q6PD62 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CTR9Q6PD62 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
CTR9Q6PD62 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.39■■□□□ 1.82
CTR9Q6PD62 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.39■■□□□ 1.81
CTR9Q6PD62 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CTR9Q6PD62 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
CTR9Q6PD62 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.39■■□□□ 1.81
CTR9Q6PD62 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CTR9Q6PD62 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CTR9Q6PD62 OR2I1P-207ENST00000453522 948 ntBASIC26.38■■□□□ 1.81
CTR9Q6PD62 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC26.38■■□□□ 1.81
CTR9Q6PD62 AC092068.2-201ENST00000590491 1708 ntBASIC26.38■■□□□ 1.81
CTR9Q6PD62 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.38■■□□□ 1.81
CTR9Q6PD62 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CTR9Q6PD62 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.38■■□□□ 1.81
CTR9Q6PD62 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.38■■□□□ 1.81
CTR9Q6PD62 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CTR9Q6PD62 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.37■■□□□ 1.81
CTR9Q6PD62 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CTR9Q6PD62 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CTR9Q6PD62 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.37■■□□□ 1.81
CTR9Q6PD62 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.37■■□□□ 1.81
CTR9Q6PD62 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.37■■□□□ 1.81
CTR9Q6PD62 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CTR9Q6PD62 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CTR9Q6PD62 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CTR9Q6PD62 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CTR9Q6PD62 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CTR9Q6PD62 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms