Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.97■□□□□ 0.95
LPCAT4Q643R3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 AC010542.4-201ENST00000563151 1910 ntBASIC20.96■□□□□ 0.95
LPCAT4Q643R3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.96■□□□□ 0.95
LPCAT4Q643R3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LPCAT4Q643R3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LPCAT4Q643R3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 SMPD5-203ENST00000639008 1464 ntBASIC20.93■□□□□ 0.94
LPCAT4Q643R3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LPCAT4Q643R3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT4Q643R3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT4Q643R3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT4Q643R3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.92■□□□□ 0.94
LPCAT4Q643R3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.92■□□□□ 0.94
LPCAT4Q643R3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LPCAT4Q643R3 AL157384.1-201ENST00000445995 2473 ntBASIC20.92■□□□□ 0.94
LPCAT4Q643R3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT4Q643R3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LPCAT4Q643R3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT4Q643R3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT4Q643R3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LPCAT4Q643R3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LPCAT4Q643R3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 AC090877.2-201ENST00000558441 1738 ntBASIC20.9■□□□□ 0.94
LPCAT4Q643R3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LPCAT4Q643R3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.89■□□□□ 0.94
LPCAT4Q643R3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.89■□□□□ 0.94
LPCAT4Q643R3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT4Q643R3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT4Q643R3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LPCAT4Q643R3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.89■□□□□ 0.93
LPCAT4Q643R3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms