Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VARS2Q5ST30 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VARS2Q5ST30 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VARS2Q5ST30 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
VARS2Q5ST30 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
VARS2Q5ST30 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.67■■□□□ 1.38
VARS2Q5ST30 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.66■■□□□ 1.38
VARS2Q5ST30 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.66■■□□□ 1.38
VARS2Q5ST30 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
VARS2Q5ST30 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.66■■□□□ 1.38
VARS2Q5ST30 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VARS2Q5ST30 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.66■■□□□ 1.38
VARS2Q5ST30 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VARS2Q5ST30 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
VARS2Q5ST30 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VARS2Q5ST30 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VARS2Q5ST30 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VARS2Q5ST30 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
VARS2Q5ST30 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VARS2Q5ST30 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
VARS2Q5ST30 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
VARS2Q5ST30 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
VARS2Q5ST30 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VARS2Q5ST30 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VARS2Q5ST30 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.64■■□□□ 1.37
VARS2Q5ST30 MIR572-201ENST00000384983 95 ntBASIC23.64■■□□□ 1.37
VARS2Q5ST30 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.64■■□□□ 1.37
VARS2Q5ST30 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VARS2Q5ST30 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.64■■□□□ 1.37
VARS2Q5ST30 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.64■■□□□ 1.37
VARS2Q5ST30 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
VARS2Q5ST30 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
VARS2Q5ST30 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.64■■□□□ 1.37
VARS2Q5ST30 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 AL162430.1-201ENST00000480705 870 ntBASIC23.63■■□□□ 1.37
VARS2Q5ST30 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VARS2Q5ST30 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.62■■□□□ 1.37
VARS2Q5ST30 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
VARS2Q5ST30 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.62■■□□□ 1.37
VARS2Q5ST30 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
VARS2Q5ST30 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.62■■□□□ 1.37
VARS2Q5ST30 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VARS2Q5ST30 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
VARS2Q5ST30 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
VARS2Q5ST30 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
VARS2Q5ST30 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
VARS2Q5ST30 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 AP005435.1-201ENST00000529293 1178 ntBASIC23.61■■□□□ 1.37
VARS2Q5ST30 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 AL358852.1-201ENST00000623174 1268 ntBASIC23.61■■□□□ 1.37
VARS2Q5ST30 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
VARS2Q5ST30 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.61■■□□□ 1.37
VARS2Q5ST30 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
VARS2Q5ST30 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VARS2Q5ST30 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
VARS2Q5ST30 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
VARS2Q5ST30 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
VARS2Q5ST30 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
VARS2Q5ST30 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
VARS2Q5ST30 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
VARS2Q5ST30 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VARS2Q5ST30 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VARS2Q5ST30 YBX1P1-201ENST00000445822 960 ntBASIC23.59■■□□□ 1.37
VARS2Q5ST30 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.59■■□□□ 1.37
VARS2Q5ST30 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VARS2Q5ST30 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.59■■□□□ 1.37
VARS2Q5ST30 AC012414.1-201ENST00000556676 535 ntBASIC23.59■■□□□ 1.37
VARS2Q5ST30 AL353803.4-201ENST00000565882 1934 ntBASIC23.59■■□□□ 1.37
VARS2Q5ST30 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
VARS2Q5ST30 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
VARS2Q5ST30 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
VARS2Q5ST30 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VARS2Q5ST30 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
VARS2Q5ST30 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
VARS2Q5ST30 MIR6084-201ENST00000622012 110 ntBASIC23.58■■□□□ 1.37
VARS2Q5ST30 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
VARS2Q5ST30 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VARS2Q5ST30 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms