Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTSL3PQ5NE16 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.94■■□□□ 1.1
CTSL3PQ5NE16 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CTSL3PQ5NE16 AC233723.2-201ENST00000623798 2106 ntBASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CTSL3PQ5NE16 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 AC006455.2-201ENST00000429931 906 ntBASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 AC009086.3-201ENST00000623486 1008 ntBASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CTSL3PQ5NE16 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CTSL3PQ5NE16 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CTSL3PQ5NE16 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CTSL3PQ5NE16 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.89■■□□□ 1.1
CTSL3PQ5NE16 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.89■■□□□ 1.09
CTSL3PQ5NE16 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
CTSL3PQ5NE16 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms