Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 MED17-227ENST00000640521 2047 ntTSL 5 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
LINC01554Q52M75 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC11.11□□□□□ -0.63
LINC01554Q52M75 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
LINC01554Q52M75 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.1□□□□□ -0.63
LINC01554Q52M75 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
LINC01554Q52M75 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
LINC01554Q52M75 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 WWC2-AS2-201ENST00000578387 2183 ntBASIC11.08□□□□□ -0.64
LINC01554Q52M75 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 AC110285.7-201ENST00000624417 1536 ntBASIC11.08□□□□□ -0.64
LINC01554Q52M75 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01554Q52M75 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 ME2-208ENST00000638937 2471 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01554Q52M75 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms