Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRTGQ2VWP7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRTGQ2VWP7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PRTGQ2VWP7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.11■□□□□ 0.97
PRTGQ2VWP7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 AC091305.1-201ENST00000479476 895 ntBASIC21.1■□□□□ 0.97
PRTGQ2VWP7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRTGQ2VWP7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 AC027682.1-201ENST00000562846 899 ntBASIC21.09■□□□□ 0.97
PRTGQ2VWP7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.09■□□□□ 0.97
PRTGQ2VWP7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRTGQ2VWP7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.08■□□□□ 0.97
PRTGQ2VWP7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRTGQ2VWP7 OR2I1P-207ENST00000453522 948 ntBASIC21.08■□□□□ 0.97
PRTGQ2VWP7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.08■□□□□ 0.97
PRTGQ2VWP7 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.08■□□□□ 0.97
PRTGQ2VWP7 AC233992.3-201ENST00000607491 485 ntBASIC21.08■□□□□ 0.97
PRTGQ2VWP7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRTGQ2VWP7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.08■□□□□ 0.96
PRTGQ2VWP7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 SLC47A1P1-202ENST00000449666 945 ntBASIC21.07■□□□□ 0.96
PRTGQ2VWP7 AC008764.7-201ENST00000593779 1081 ntBASIC21.07■□□□□ 0.96
PRTGQ2VWP7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 RASA4CP-201ENST00000424092 1398 ntBASIC21.07■□□□□ 0.96
PRTGQ2VWP7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PRTGQ2VWP7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 AC099791.1-201ENST00000416440 715 ntBASIC21.06■□□□□ 0.96
PRTGQ2VWP7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRTGQ2VWP7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 CA15P2-201ENST00000611168 834 ntBASIC21.05■□□□□ 0.96
PRTGQ2VWP7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.05■□□□□ 0.96
PRTGQ2VWP7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 AC010525.1-201ENST00000585559 441 ntBASIC21.04■□□□□ 0.96
PRTGQ2VWP7 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 DUSP8P3-201ENST00000399571 1760 ntBASIC21.04■□□□□ 0.96
PRTGQ2VWP7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.04■□□□□ 0.96
PRTGQ2VWP7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms