Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 RPS2P52-201ENST00000469610 820 ntBASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RSPO4Q2I0M5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 AC133041.1-202ENST00000642053 222 ntBASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RSPO4Q2I0M5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 OR2I1P-207ENST00000453522 948 ntBASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.77■■□□□ 1.08
RSPO4Q2I0M5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.76■■□□□ 1.07
RSPO4Q2I0M5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 MFSD11-216ENST00000590393 1141 ntBASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 SMUG1P1-201ENST00000590640 811 ntBASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
RSPO4Q2I0M5 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 AC005181.1-201ENST00000604782 1256 ntBASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RSPO4Q2I0M5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 AC231657.2-201ENST00000624556 255 ntBASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RSPO4Q2I0M5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 AL596275.1-201ENST00000423464 877 ntBASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.72■■□□□ 1.07
RSPO4Q2I0M5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RSPO4Q2I0M5 AC007322.1-201ENST00000426983 750 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms