Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3AP84243 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3AP84243 AC006455.2-201ENST00000429931 906 ntBASIC19.89■□□□□ 0.77
H3F3AP84243 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
H3F3AP84243 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.89■□□□□ 0.77
H3F3AP84243 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.89■□□□□ 0.77
H3F3AP84243 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.89■□□□□ 0.77
H3F3AP84243 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
H3F3AP84243 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3AP84243 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
H3F3AP84243 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
H3F3AP84243 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3AP84243 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3AP84243 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
H3F3AP84243 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3AP84243 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
H3F3AP84243 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.88■□□□□ 0.77
H3F3AP84243 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.88■□□□□ 0.77
H3F3AP84243 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
H3F3AP84243 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
H3F3AP84243 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
H3F3AP84243 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 MIR3181-201ENST00000578512 73 ntBASIC19.87■□□□□ 0.77
H3F3AP84243 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.87■□□□□ 0.77
H3F3AP84243 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
H3F3AP84243 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
H3F3AP84243 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.87■□□□□ 0.77
H3F3AP84243 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.87■□□□□ 0.77
H3F3AP84243 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.86■□□□□ 0.77
H3F3AP84243 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3AP84243 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
H3F3AP84243 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3AP84243 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.86■□□□□ 0.77
H3F3AP84243 AL138724.1-201ENST00000606771 1088 ntBASIC19.86■□□□□ 0.77
H3F3AP84243 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
H3F3AP84243 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
H3F3AP84243 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
H3F3AP84243 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.85■□□□□ 0.77
H3F3AP84243 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.85■□□□□ 0.77
H3F3AP84243 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.85■□□□□ 0.77
H3F3AP84243 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
H3F3AP84243 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
H3F3AP84243 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.85■□□□□ 0.77
H3F3AP84243 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.85■□□□□ 0.77
H3F3AP84243 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
H3F3AP84243 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.85■□□□□ 0.77
H3F3AP84243 SYT6-210ENST00000641643 1587 ntBASIC19.85■□□□□ 0.77
H3F3AP84243 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
H3F3AP84243 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
H3F3AP84243 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.84■□□□□ 0.77
H3F3AP84243 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.84■□□□□ 0.77
H3F3AP84243 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
H3F3AP84243 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.84■□□□□ 0.77
H3F3AP84243 pRNA.6-201ENST00000610482 90 ntBASIC19.84■□□□□ 0.77
H3F3AP84243 pRNA.5-201ENST00000612139 90 ntBASIC19.84■□□□□ 0.77
H3F3AP84243 pRNA.11-201ENST00000618423 90 ntBASIC19.84■□□□□ 0.77
H3F3AP84243 pRNA.13-201ENST00000619112 90 ntBASIC19.84■□□□□ 0.77
H3F3AP84243 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
H3F3AP84243 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
H3F3AP84243 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.84■□□□□ 0.77
H3F3AP84243 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
H3F3AP84243 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
H3F3AP84243 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
H3F3AP84243 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
H3F3AP84243 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.83■□□□□ 0.77
H3F3AP84243 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
H3F3AP84243 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
H3F3AP84243 SERBP1P1-201ENST00000396021 1160 ntBASIC19.83■□□□□ 0.77
H3F3AP84243 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.83■□□□□ 0.77
H3F3AP84243 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.83■□□□□ 0.77
H3F3AP84243 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
H3F3AP84243 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
H3F3AP84243 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
H3F3AP84243 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
H3F3AP84243 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.82■□□□□ 0.76
H3F3AP84243 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.82■□□□□ 0.76
H3F3AP84243 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
H3F3AP84243 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
H3F3AP84243 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
H3F3AP84243 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms