Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPCS3P61009 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.99■□□□□ 0.47
SPCS3P61009 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.99■□□□□ 0.47
SPCS3P61009 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SPCS3P61009 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 AC137767.1-201ENST00000602918 1920 ntBASIC17.98■□□□□ 0.47
SPCS3P61009 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SPCS3P61009 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SPCS3P61009 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.98■□□□□ 0.47
SPCS3P61009 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SPCS3P61009 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
SPCS3P61009 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPCS3P61009 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.97■□□□□ 0.47
SPCS3P61009 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
SPCS3P61009 AC120024.1-201ENST00000562672 995 ntBASIC17.97■□□□□ 0.47
SPCS3P61009 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPCS3P61009 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.97■□□□□ 0.47
SPCS3P61009 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SPCS3P61009 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SPCS3P61009 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SPCS3P61009 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
SPCS3P61009 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPCS3P61009 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.96■□□□□ 0.46
SPCS3P61009 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SPCS3P61009 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS3P61009 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS3P61009 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.95■□□□□ 0.46
SPCS3P61009 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS3P61009 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.95■□□□□ 0.46
SPCS3P61009 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS3P61009 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.95■□□□□ 0.46
SPCS3P61009 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS3P61009 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SPCS3P61009 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SPCS3P61009 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.95■□□□□ 0.46
SPCS3P61009 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPCS3P61009 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SPCS3P61009 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.94■□□□□ 0.46
SPCS3P61009 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SPCS3P61009 AC004448.1-201ENST00000458332 883 ntBASIC17.94■□□□□ 0.46
SPCS3P61009 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPCS3P61009 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SPCS3P61009 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS3P61009 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS3P61009 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS3P61009 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SPCS3P61009 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS3P61009 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS3P61009 AF131216.4-201ENST00000638924 1588 ntBASIC17.93■□□□□ 0.46
SPCS3P61009 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.93■□□□□ 0.46
SPCS3P61009 KRT18P24-201ENST00000344739 1156 ntBASIC17.93■□□□□ 0.46
SPCS3P61009 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPCS3P61009 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.93■□□□□ 0.46
SPCS3P61009 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.93■□□□□ 0.46
SPCS3P61009 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.93■□□□□ 0.46
SPCS3P61009 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SPCS3P61009 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SPCS3P61009 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.92■□□□□ 0.46
SPCS3P61009 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPCS3P61009 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPCS3P61009 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms