Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN18P56856 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN18P56856 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLDN18P56856 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.93■□□□□ 0.78
CLDN18P56856 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN18P56856 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN18P56856 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN18P56856 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN18P56856 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN18P56856 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN18P56856 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN18P56856 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN18P56856 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN18P56856 OR2I1P-207ENST00000453522 948 ntBASIC19.92■□□□□ 0.78
CLDN18P56856 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.92■□□□□ 0.78
CLDN18P56856 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN18P56856 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN18P56856 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN18P56856 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN18P56856 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN18P56856 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN18P56856 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN18P56856 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN18P56856 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLDN18P56856 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN18P56856 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN18P56856 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.91■□□□□ 0.78
CLDN18P56856 AC092068.2-201ENST00000590491 1708 ntBASIC19.9■□□□□ 0.78
CLDN18P56856 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLDN18P56856 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN18P56856 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN18P56856 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN18P56856 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 MIR935-201ENST00000401179 91 ntBASIC19.9■□□□□ 0.78
CLDN18P56856 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLDN18P56856 AC010525.1-201ENST00000585559 441 ntBASIC19.9■□□□□ 0.78
CLDN18P56856 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN18P56856 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLDN18P56856 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN18P56856 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLDN18P56856 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN18P56856 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN18P56856 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN18P56856 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN18P56856 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN18P56856 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CLDN18P56856 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.89■□□□□ 0.77
CLDN18P56856 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN18P56856 AC126544.1-201ENST00000580842 1059 ntBASIC19.89■□□□□ 0.77
CLDN18P56856 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN18P56856 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN18P56856 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CLDN18P56856 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN18P56856 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN18P56856 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLDN18P56856 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN18P56856 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN18P56856 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN18P56856 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDN18P56856 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN18P56856 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN18P56856 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
CLDN18P56856 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN18P56856 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN18P56856 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN18P56856 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLDN18P56856 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN18P56856 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN18P56856 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLDN18P56856 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN18P56856 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN18P56856 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN18P56856 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CLDN18P56856 AC004687.1-201ENST00000579003 1625 ntBASIC19.87■□□□□ 0.77
CLDN18P56856 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN18P56856 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.86■□□□□ 0.77
CLDN18P56856 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN18P56856 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN18P56856 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN18P56856 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN18P56856 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN18P56856 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN18P56856 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN18P56856 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN18P56856 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDN18P56856 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN18P56856 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN18P56856 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CLDN18P56856 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN18P56856 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN18P56856 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN18P56856 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN18P56856 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.85■□□□□ 0.77
CLDN18P56856 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms