Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
APOC4P55056 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.31■□□□□ 0.2
APOC4P55056 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
APOC4P55056 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
APOC4P55056 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
APOC4P55056 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.3■□□□□ 0.2
APOC4P55056 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.3■□□□□ 0.2
APOC4P55056 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
APOC4P55056 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
APOC4P55056 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC4P55056 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC4P55056 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC4P55056 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
APOC4P55056 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.29■□□□□ 0.2
APOC4P55056 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.29■□□□□ 0.2
APOC4P55056 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.29■□□□□ 0.2
APOC4P55056 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.29■□□□□ 0.2
APOC4P55056 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
APOC4P55056 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC4P55056 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC4P55056 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
APOC4P55056 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.28■□□□□ 0.2
APOC4P55056 SLC47A1P1-202ENST00000449666 945 ntBASIC16.28■□□□□ 0.2
APOC4P55056 OR2I1P-207ENST00000453522 948 ntBASIC16.28■□□□□ 0.2
APOC4P55056 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APOC4P55056 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.28■□□□□ 0.2
APOC4P55056 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
APOC4P55056 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
APOC4P55056 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
APOC4P55056 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.28■□□□□ 0.2
APOC4P55056 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
APOC4P55056 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOC4P55056 IRS3P-201ENST00000223076 1006 ntBASIC16.27■□□□□ 0.2
APOC4P55056 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOC4P55056 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
APOC4P55056 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.27■□□□□ 0.2
APOC4P55056 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.27■□□□□ 0.2
APOC4P55056 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
APOC4P55056 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APOC4P55056 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
APOC4P55056 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
APOC4P55056 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.27■□□□□ 0.19
APOC4P55056 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
APOC4P55056 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
APOC4P55056 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
APOC4P55056 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.26■□□□□ 0.19
APOC4P55056 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.26■□□□□ 0.19
APOC4P55056 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 ABCB10P4-201ENST00000566803 2184 ntBASIC16.26■□□□□ 0.19
APOC4P55056 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
APOC4P55056 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.26■□□□□ 0.19
APOC4P55056 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 AC079630.1-202ENST00000618127 1840 ntBASIC16.26■□□□□ 0.19
APOC4P55056 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
APOC4P55056 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
APOC4P55056 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APOC4P55056 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APOC4P55056 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
APOC4P55056 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APOC4P55056 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
APOC4P55056 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
APOC4P55056 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APOC4P55056 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.25■□□□□ 0.19
APOC4P55056 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.25■□□□□ 0.19
APOC4P55056 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.25■□□□□ 0.19
APOC4P55056 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
APOC4P55056 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APOC4P55056 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
APOC4P55056 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
APOC4P55056 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.25■□□□□ 0.19
APOC4P55056 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
APOC4P55056 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
APOC4P55056 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
APOC4P55056 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.24■□□□□ 0.19
APOC4P55056 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
APOC4P55056 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
APOC4P55056 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.24■□□□□ 0.19
APOC4P55056 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
APOC4P55056 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms