Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 VPS73YGL104C 1461 nt3.57□□□□□ -1.84
CUP9P41817 YHR112CYHR112C 1137 nt3.57□□□□□ -1.84
CUP9P41817 RPL14AYKL006W 417 nt3.57□□□□□ -1.84
CUP9P41817 MST1YKL194C 1389 nt3.57□□□□□ -1.84
CUP9P41817 PAU17YLL025W 375 nt3.57□□□□□ -1.84
CUP9P41817 YMR130WYMR130W 909 nt3.57□□□□□ -1.84
CUP9P41817 ROT1YMR200W 771 nt3.57□□□□□ -1.84
CUP9P41817 YMR315WYMR315W 1050 nt3.57□□□□□ -1.84
CUP9P41817 PHO87YCR037C 2772 nt3.57□□□□□ -1.84
CUP9P41817 PTA1YAL043C 2358 nt3.56□□□□□ -1.84
CUP9P41817 CBP1YJL209W 1965 nt3.56□□□□□ -1.84
CUP9P41817 YGR027W-BYGR027W-B 5268 nt3.56□□□□□ -1.84
CUP9P41817 YLR227W-BYLR227W-B 5268 nt3.56□□□□□ -1.84
CUP9P41817 YPR158C-DYPR158C-D 5268 nt3.56□□□□□ -1.84
CUP9P41817 YDR282CYDR282C 1245 nt3.56□□□□□ -1.84
CUP9P41817 ISA1YLL027W 753 nt3.56□□□□□ -1.84
CUP9P41817 YMR082CYMR082C 357 nt3.56□□□□□ -1.84
CUP9P41817 CWC25YNL245C 540 nt3.56□□□□□ -1.84
CUP9P41817 MRE11YMR224C 2079 nt3.56□□□□□ -1.84
CUP9P41817 YOL153CYOL153C 1746 nt3.56□□□□□ -1.84
CUP9P41817 TDA11YHR159W 1515 nt3.55□□□□□ -1.84
CUP9P41817 YBR139WYBR139W 1527 nt3.55□□□□□ -1.84
CUP9P41817 SSH1YBR283C 1473 nt3.55□□□□□ -1.84
CUP9P41817 RTT103YDR289C 1230 nt3.55□□□□□ -1.84
CUP9P41817 OTU1YFL044C 906 nt3.55□□□□□ -1.84
CUP9P41817 MTM1YGR257C 1101 nt3.55□□□□□ -1.84
CUP9P41817 NVJ1YHR195W 966 nt3.55□□□□□ -1.84
CUP9P41817 SGN1YIR001C 753 nt3.55□□□□□ -1.84
CUP9P41817 YJR112W-AYJR112W-A 330 nt3.55□□□□□ -1.84
CUP9P41817 YSH1YLR277C 2340 nt3.55□□□□□ -1.84
CUP9P41817 ALG9YNL219C 1668 nt3.55□□□□□ -1.84
CUP9P41817 FAR8YMR029C 1572 nt3.55□□□□□ -1.84
CUP9P41817 FKH2YNL068C 2589 nt3.55□□□□□ -1.84
CUP9P41817 CHL1YPL008W 2586 nt3.55□□□□□ -1.84
CUP9P41817 COX4YGL187C 468 nt3.54□□□□□ -1.84
CUP9P41817 PRE9YGR135W 777 nt3.54□□□□□ -1.84
CUP9P41817 YKL169CYKL169C 384 nt3.54□□□□□ -1.84
CUP9P41817 YLR125WYLR125W 411 nt3.54□□□□□ -1.84
CUP9P41817 SHE1YBL031W 1017 nt3.54□□□□□ -1.84
CUP9P41817 YOR292CYOR292C 930 nt3.54□□□□□ -1.84
CUP9P41817 MET16YPR167C 786 nt3.54□□□□□ -1.84
CUP9P41817 PZF1YPR186C 1290 nt3.54□□□□□ -1.84
CUP9P41817 SRB6YBR253W 366 nt3.54□□□□□ -1.84
CUP9P41817 TRS85YDR108W 2097 nt3.53□□□□□ -1.84
CUP9P41817 DPH1YIL103W 1278 nt3.53□□□□□ -1.84
CUP9P41817 HIS5YIL116W 1158 nt3.53□□□□□ -1.84
CUP9P41817 GTR1YML121W 933 nt3.53□□□□□ -1.84
CUP9P41817 TIF34YMR146C 1044 nt3.53□□□□□ -1.84
CUP9P41817 TOM40YMR203W 1164 nt3.53□□□□□ -1.84
CUP9P41817 YNR061CYNR061C 660 nt3.53□□□□□ -1.84
CUP9P41817 YPL077CYPL077C 723 nt3.53□□□□□ -1.84
CUP9P41817 YLR152CYLR152C 1731 nt3.53□□□□□ -1.85
CUP9P41817 TPA1YER049W 1935 nt3.52□□□□□ -1.85
CUP9P41817 YND1YER005W 1893 nt3.52□□□□□ -1.85
CUP9P41817 NBP2YDR162C 711 nt3.52□□□□□ -1.85
CUP9P41817 RPL8AYHL033C 771 nt3.52□□□□□ -1.85
CUP9P41817 SWP1YMR149W 861 nt3.52□□□□□ -1.85
CUP9P41817 RPS19AYOL121C 435 nt3.52□□□□□ -1.85
CUP9P41817 YBR056W-AYBR056W-A 201 nt3.52□□□□□ -1.85
CUP9P41817 OAF1YAL051W 3144 nt3.52□□□□□ -1.85
CUP9P41817 MRM2YGL136C 963 nt3.51□□□□□ -1.85
CUP9P41817 SIW14YNL032W 846 nt3.51□□□□□ -1.85
CUP9P41817 snR3snR3 194 nt3.51□□□□□ -1.85
CUP9P41817 LOS1YKL205W 3303 nt3.51□□□□□ -1.85
CUP9P41817 IFM1YOL023W 2031 nt3.51□□□□□ -1.85
CUP9P41817 ATG26YLR189C 3597 nt3.51□□□□□ -1.85
CUP9P41817 SKM1YOL113W 1968 nt3.51□□□□□ -1.85
CUP9P41817 NUG1YER006W 1563 nt3.51□□□□□ -1.85
CUP9P41817 BIK1YCL029C 1323 nt3.5□□□□□ -1.85
CUP9P41817 SRB5YGR104C 924 nt3.5□□□□□ -1.85
CUP9P41817 BNS1YGR230W 414 nt3.5□□□□□ -1.85
CUP9P41817 HIS6YIL020C 786 nt3.5□□□□□ -1.85
CUP9P41817 RPL18BYNL301C 561 nt3.5□□□□□ -1.85
CUP9P41817 NCE102YPR149W 522 nt3.5□□□□□ -1.85
CUP9P41817 THI7YLR237W 1797 nt3.5□□□□□ -1.85
CUP9P41817 GIP4YAL031C 2283 nt3.5□□□□□ -1.85
CUP9P41817 MCP2YLR253W 1710 nt3.5□□□□□ -1.85
CUP9P41817 SMP1YBR182C 1359 nt3.5□□□□□ -1.85
CUP9P41817 LDB17YDL146W 1476 nt3.49□□□□□ -1.85
CUP9P41817 PRP40YKL012W 1752 nt3.49□□□□□ -1.85
CUP9P41817 HOS3YPL116W 2094 nt3.49□□□□□ -1.85
CUP9P41817 MAD2YJL030W 591 nt3.49□□□□□ -1.85
CUP9P41817 HMX1YLR205C 954 nt3.49□□□□□ -1.85
CUP9P41817 SLD2YKL108W 1362 nt3.49□□□□□ -1.85
CUP9P41817 PPQ1YPL179W 1650 nt3.49□□□□□ -1.85
CUP9P41817 TDA1YMR291W 1761 nt3.48□□□□□ -1.85
CUP9P41817 NUP133YKR082W 3474 nt3.48□□□□□ -1.85
CUP9P41817 HMG1YML075C 3165 nt3.48□□□□□ -1.85
CUP9P41817 ARP10YDR106W 855 nt3.48□□□□□ -1.85
CUP9P41817 SPR28YDR218C 1272 nt3.48□□□□□ -1.85
CUP9P41817 MAG1YER142C 891 nt3.48□□□□□ -1.85
CUP9P41817 YGL063C-AYGL063C-A 150 nt3.48□□□□□ -1.85
CUP9P41817 MAP1YLR244C 1164 nt3.48□□□□□ -1.85
CUP9P41817 YBL036CYBL036C 774 nt3.48□□□□□ -1.85
CUP9P41817 GAL11YOL051W 3246 nt3.48□□□□□ -1.85
CUP9P41817 MIS1YBR084W 2928 nt3.48□□□□□ -1.85
CUP9P41817 VID28YIL017C 2766 nt3.48□□□□□ -1.85
CUP9P41817 IML2YJL082W 2196 nt3.48□□□□□ -1.85
CUP9P41817 DIP2YLR129W 2832 nt3.48□□□□□ -1.85
CUP9P41817 YML020WYML020W 1995 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms