Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 YLR118CYLR118C 684 nt3.8□□□□□ -1.8
CDC40P40968 OAZ1YPL052W 879 nt3.8□□□□□ -1.8
CDC40P40968 EGT2YNL327W 3126 nt3.8□□□□□ -1.8
CDC40P40968 NMD3YHR170W 1557 nt3.8□□□□□ -1.8
CDC40P40968 TOG1YER184C 2385 nt3.8□□□□□ -1.8
CDC40P40968 NUP2YLR335W 2163 nt3.79□□□□□ -1.8
CDC40P40968 PUB1YNL016W 1362 nt3.79□□□□□ -1.8
CDC40P40968 TYR1YBR166C 1359 nt3.79□□□□□ -1.8
CDC40P40968 GZF3YJL110C 1656 nt3.79□□□□□ -1.8
CDC40P40968 PCL9YDL179W 915 nt3.79□□□□□ -1.8
CDC40P40968 MLC1YGL106W 450 nt3.79□□□□□ -1.8
CDC40P40968 COS12YGL263W 1143 nt3.79□□□□□ -1.8
CDC40P40968 GCD7YLR291C 1146 nt3.79□□□□□ -1.8
CDC40P40968 HTA2YBL003C 399 nt3.79□□□□□ -1.8
CDC40P40968 YLR428CYLR428C 345 nt3.79□□□□□ -1.8
CDC40P40968 ERD2YBL040C 660 nt3.79□□□□□ -1.8
CDC40P40968 UPC2YDR213W 2742 nt3.79□□□□□ -1.8
CDC40P40968 TGL1YKL140W 1647 nt3.79□□□□□ -1.8
CDC40P40968 PAH1YMR165C 2589 nt3.79□□□□□ -1.8
CDC40P40968 VAC7YNL054W 3498 nt3.79□□□□□ -1.8
CDC40P40968 OSH2YDL019C 3852 nt3.78□□□□□ -1.8
CDC40P40968 YCL075WYCL075W 441 nt3.78□□□□□ -1.8
CDC40P40968 RMD1YDL001W 1293 nt3.78□□□□□ -1.8
CDC40P40968 MAF1YDR005C 1188 nt3.78□□□□□ -1.8
CDC40P40968 YGR182CYGR182C 354 nt3.78□□□□□ -1.8
CDC40P40968 YJL218WYJL218W 591 nt3.78□□□□□ -1.8
CDC40P40968 PAM18YLR008C 507 nt3.78□□□□□ -1.8
CDC40P40968 VTA1YLR181C 993 nt3.78□□□□□ -1.8
CDC40P40968 VPS21YOR089C 633 nt3.78□□□□□ -1.8
CDC40P40968 KTR3YBR205W 1215 nt3.78□□□□□ -1.8
CDC40P40968 FRM2YCL026C-A 582 nt3.78□□□□□ -1.8
CDC40P40968 SPB4YFL002C 1821 nt3.78□□□□□ -1.8
CDC40P40968 RRN11YML043C 1524 nt3.78□□□□□ -1.8
CDC40P40968 ICE2YIL090W 1476 nt3.78□□□□□ -1.8
CDC40P40968 PHO8YDR481C 1701 nt3.78□□□□□ -1.8
CDC40P40968 GEM1YAL048C 1989 nt3.78□□□□□ -1.8
CDC40P40968 SEN1YLR430W 6696 nt3.78□□□□□ -1.8
CDC40P40968 SRO9YCL037C 1305 nt3.77□□□□□ -1.81
CDC40P40968 AIM21YIR003W 2040 nt3.77□□□□□ -1.81
CDC40P40968 MTR10YOR160W 2919 nt3.77□□□□□ -1.81
CDC40P40968 YFL064CYFL064C 525 nt3.77□□□□□ -1.81
CDC40P40968 RSM25YIL093C 795 nt3.77□□□□□ -1.81
CDC40P40968 FUN19YAL034C 1242 nt3.77□□□□□ -1.81
CDC40P40968 YOL050CYOL050C 321 nt3.77□□□□□ -1.81
CDC40P40968 NHP6AYPR052C 282 nt3.77□□□□□ -1.81
CDC40P40968 SHE3YBR130C 1278 nt3.77□□□□□ -1.81
CDC40P40968 VPS45YGL095C 1734 nt3.77□□□□□ -1.81
CDC40P40968 TAF5YBR198C 2397 nt3.77□□□□□ -1.81
CDC40P40968 XKS1YGR194C 1803 nt3.77□□□□□ -1.81
CDC40P40968 SMP3YOR149C 1551 nt3.76□□□□□ -1.81
CDC40P40968 BUD6YLR319C 2367 nt3.76□□□□□ -1.81
CDC40P40968 YMR1YJR110W 2067 nt3.76□□□□□ -1.81
CDC40P40968 YHL012WYHL012W 1482 nt3.76□□□□□ -1.81
CDC40P40968 YCL068CYCL068C 783 nt3.76□□□□□ -1.81
CDC40P40968 ERG26YGL001C 1050 nt3.76□□□□□ -1.81
CDC40P40968 TDH3YGR192C 999 nt3.76□□□□□ -1.81
CDC40P40968 RAD27YKL113C 1149 nt3.76□□□□□ -1.81
CDC40P40968 PEX12YMR026C 1200 nt3.76□□□□□ -1.81
CDC40P40968 SFT2YBL102W 648 nt3.76□□□□□ -1.81
CDC40P40968 RPS19AYOL121C 435 nt3.76□□□□□ -1.81
CDC40P40968 YPL077CYPL077C 723 nt3.76□□□□□ -1.81
CDC40P40968 EAR1YMR171C 1653 nt3.75□□□□□ -1.81
CDC40P40968 JHD2YJR119C 2187 nt3.75□□□□□ -1.81
CDC40P40968 RIP1YEL024W 648 nt3.75□□□□□ -1.81
CDC40P40968 SEH1YGL100W 1050 nt3.75□□□□□ -1.81
CDC40P40968 SUT1YGL162W 900 nt3.75□□□□□ -1.81
CDC40P40968 ARD1YHR013C 717 nt3.75□□□□□ -1.81
CDC40P40968 YHR127WYHR127W 732 nt3.75□□□□□ -1.81
CDC40P40968 YJL068CYJL068C 900 nt3.75□□□□□ -1.81
CDC40P40968 YMR130WYMR130W 909 nt3.75□□□□□ -1.81
CDC40P40968 MFA2YNL145W 117 nt3.75□□□□□ -1.81
CDC40P40968 SAS4YDR181C 1446 nt3.75□□□□□ -1.81
CDC40P40968 PEP5YMR231W 3090 nt3.75□□□□□ -1.81
CDC40P40968 TRS85YDR108W 2097 nt3.75□□□□□ -1.81
CDC40P40968 YER158CYER158C 1722 nt3.75□□□□□ -1.81
CDC40P40968 MET4YNL103W 2019 nt3.75□□□□□ -1.81
CDC40P40968 GSC2YGR032W 5688 nt3.74□□□□□ -1.81
CDC40P40968 ADY2YCR010C 852 nt3.74□□□□□ -1.81
CDC40P40968 TAF10YDR167W 621 nt3.74□□□□□ -1.81
CDC40P40968 LSM6YDR378C 261 nt3.74□□□□□ -1.81
CDC40P40968 YGR066CYGR066C 879 nt3.74□□□□□ -1.81
CDC40P40968 YIL086CYIL086C 309 nt3.74□□□□□ -1.81
CDC40P40968 TIM54YJL054W 1437 nt3.74□□□□□ -1.81
CDC40P40968 SRP40YKR092C 1221 nt3.74□□□□□ -1.81
CDC40P40968 POM33YLL023C 840 nt3.74□□□□□ -1.81
CDC40P40968 YLR152CYLR152C 1731 nt3.74□□□□□ -1.81
CDC40P40968 YBL077WYBL077W 432 nt3.74□□□□□ -1.81
CDC40P40968 YNR071CYNR071C 1029 nt3.74□□□□□ -1.81
CDC40P40968 RCL1YOL010W 1104 nt3.74□□□□□ -1.81
CDC40P40968 POC4YPL144W 447 nt3.74□□□□□ -1.81
CDC40P40968 YPL191CYPL191C 1083 nt3.74□□□□□ -1.81
CDC40P40968 NAT1YDL040C 2565 nt3.74□□□□□ -1.81
CDC40P40968 KIP3YGL216W 2418 nt3.74□□□□□ -1.81
CDC40P40968 HOYDL227C 1761 nt3.74□□□□□ -1.81
CDC40P40968 TAF7YMR227C 1773 nt3.74□□□□□ -1.81
CDC40P40968 ARP2YDL029W 1176 nt3.73□□□□□ -1.81
CDC40P40968 NBP2YDR162C 711 nt3.73□□□□□ -1.81
CDC40P40968 MHR1YDR296W 681 nt3.73□□□□□ -1.81
CDC40P40968 HNT2YDR305C 654 nt3.73□□□□□ -1.81
CDC40P40968 YKL177WYKL177W 339 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms