Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.18■□□□□ 0.82
GDF1P27539 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GDF1P27539 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDF1P27539 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.18■□□□□ 0.82
GDF1P27539 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.18■□□□□ 0.82
GDF1P27539 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF1P27539 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
GDF1P27539 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GDF1P27539 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF1P27539 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.17■□□□□ 0.82
GDF1P27539 SLC47A1P1-202ENST00000449666 945 ntBASIC20.17■□□□□ 0.82
GDF1P27539 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF1P27539 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.17■□□□□ 0.82
GDF1P27539 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDF1P27539 AC126544.1-201ENST00000580842 1059 ntBASIC20.17■□□□□ 0.82
GDF1P27539 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.17■□□□□ 0.82
GDF1P27539 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.16■□□□□ 0.82
GDF1P27539 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.16■□□□□ 0.82
GDF1P27539 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GDF1P27539 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GDF1P27539 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDF1P27539 AL353803.4-201ENST00000565882 1934 ntBASIC20.15■□□□□ 0.82
GDF1P27539 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
GDF1P27539 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF1P27539 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GDF1P27539 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF1P27539 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF1P27539 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDF1P27539 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDF1P27539 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.15■□□□□ 0.82
GDF1P27539 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.15■□□□□ 0.82
GDF1P27539 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GDF1P27539 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GDF1P27539 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDF1P27539 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.14■□□□□ 0.81
GDF1P27539 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.14■□□□□ 0.81
GDF1P27539 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
GDF1P27539 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GDF1P27539 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.13■□□□□ 0.81
GDF1P27539 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.13■□□□□ 0.81
GDF1P27539 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF1P27539 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF1P27539 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GDF1P27539 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
GDF1P27539 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF1P27539 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.13■□□□□ 0.81
GDF1P27539 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
GDF1P27539 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDF1P27539 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDF1P27539 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDF1P27539 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
GDF1P27539 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDF1P27539 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GDF1P27539 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GDF1P27539 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDF1P27539 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
GDF1P27539 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDF1P27539 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
GDF1P27539 OR2I1P-207ENST00000453522 948 ntBASIC20.11■□□□□ 0.81
GDF1P27539 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDF1P27539 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.11■□□□□ 0.81
GDF1P27539 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDF1P27539 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDF1P27539 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.1■□□□□ 0.81
GDF1P27539 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.1■□□□□ 0.81
GDF1P27539 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GDF1P27539 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.1■□□□□ 0.81
GDF1P27539 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.1■□□□□ 0.81
GDF1P27539 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.1■□□□□ 0.81
GDF1P27539 AC010525.1-201ENST00000585559 441 ntBASIC20.1■□□□□ 0.81
GDF1P27539 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.1■□□□□ 0.81
GDF1P27539 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
GDF1P27539 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GDF1P27539 AC004687.1-201ENST00000579003 1625 ntBASIC20.09■□□□□ 0.81
GDF1P27539 ANOS2P-203ENST00000472227 1816 ntBASIC20.09■□□□□ 0.81
GDF1P27539 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
GDF1P27539 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.09■□□□□ 0.81
GDF1P27539 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms