Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HIST1H1CP16403 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H1CP16403 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
HIST1H1CP16403 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HIST1H1CP16403 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST1H1CP16403 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HIST1H1CP16403 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.94■□□□□ 0.78
HIST1H1CP16403 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.94■□□□□ 0.78
HIST1H1CP16403 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.94■□□□□ 0.78
HIST1H1CP16403 AC021242.3-201ENST00000607598 1377 ntBASIC19.94■□□□□ 0.78
HIST1H1CP16403 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 MIR6722-201ENST00000617286 78 ntBASIC19.93■□□□□ 0.78
HIST1H1CP16403 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 AC005703.6-201ENST00000623265 1329 ntBASIC19.93■□□□□ 0.78
HIST1H1CP16403 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HIST1H1CP16403 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.93■□□□□ 0.78
HIST1H1CP16403 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HIST1H1CP16403 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.92■□□□□ 0.78
HIST1H1CP16403 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H1CP16403 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST1H1CP16403 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HIST1H1CP16403 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST1H1CP16403 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H1CP16403 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H1CP16403 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HIST1H1CP16403 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H1CP16403 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H1CP16403 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 BX664725.1-201ENST00000438252 379 ntBASIC19.9■□□□□ 0.78
HIST1H1CP16403 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H1CP16403 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H1CP16403 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HIST1H1CP16403 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.89■□□□□ 0.77
HIST1H1CP16403 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H1CP16403 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HIST1H1CP16403 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.89■□□□□ 0.77
HIST1H1CP16403 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.89■□□□□ 0.77
HIST1H1CP16403 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H1CP16403 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H1CP16403 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HIST1H1CP16403 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H1CP16403 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H1CP16403 LINC01529-204ENST00000636474 1715 ntBASIC19.88■□□□□ 0.77
HIST1H1CP16403 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
HIST1H1CP16403 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.88■□□□□ 0.77
HIST1H1CP16403 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H1CP16403 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST1H1CP16403 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.88■□□□□ 0.77
HIST1H1CP16403 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H1CP16403 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H1CP16403 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
HIST1H1CP16403 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms