Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CAPN1P07384 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN1P07384 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN1P07384 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN1P07384 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN1P07384 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN1P07384 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.81■■□□□ 1.08
CAPN1P07384 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CAPN1P07384 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN1P07384 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN1P07384 AC079630.1-202ENST00000618127 1840 ntBASIC21.8■■□□□ 1.08
CAPN1P07384 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN1P07384 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN1P07384 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.8■■□□□ 1.08
CAPN1P07384 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN1P07384 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN1P07384 AC110285.6-201ENST00000617652 491 ntBASIC21.8■■□□□ 1.08
CAPN1P07384 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN1P07384 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CAPN1P07384 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CAPN1P07384 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CAPN1P07384 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.8■■□□□ 1.08
CAPN1P07384 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN1P07384 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN1P07384 AC233723.2-201ENST00000623798 2106 ntBASIC21.79■■□□□ 1.08
CAPN1P07384 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.79■■□□□ 1.08
CAPN1P07384 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN1P07384 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN1P07384 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CAPN1P07384 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN1P07384 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
CAPN1P07384 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.79■■□□□ 1.08
CAPN1P07384 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN1P07384 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN1P07384 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CAPN1P07384 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CAPN1P07384 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.78■■□□□ 1.08
CAPN1P07384 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CAPN1P07384 AC079834.2-201ENST00000609776 1949 ntBASIC21.78■■□□□ 1.08
CAPN1P07384 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CAPN1P07384 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN1P07384 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CAPN1P07384 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CAPN1P07384 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN1P07384 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.77■■□□□ 1.08
CAPN1P07384 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CAPN1P07384 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CAPN1P07384 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CAPN1P07384 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN1P07384 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CAPN1P07384 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN1P07384 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN1P07384 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.76■■□□□ 1.07
CAPN1P07384 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN1P07384 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN1P07384 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CAPN1P07384 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN1P07384 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CAPN1P07384 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN1P07384 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CAPN1P07384 AL117328.2-201ENST00000624617 1940 ntBASIC21.75■■□□□ 1.07
CAPN1P07384 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN1P07384 AC096631.2-201ENST00000436136 790 ntBASIC21.75■■□□□ 1.07
CAPN1P07384 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN1P07384 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN1P07384 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN1P07384 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CAPN1P07384 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.75■■□□□ 1.07
CAPN1P07384 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN1P07384 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN1P07384 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPN1P07384 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.74■■□□□ 1.07
CAPN1P07384 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPN1P07384 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN1P07384 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN1P07384 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.74■■□□□ 1.07
CAPN1P07384 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPN1P07384 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN1P07384 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN1P07384 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.73■■□□□ 1.07
CAPN1P07384 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN1P07384 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN1P07384 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPN1P07384 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPN1P07384 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms