Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPXO76031 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
CLPXO76031 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPXO76031 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.11■□□□□ 0.81
CLPXO76031 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPXO76031 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLPXO76031 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLPXO76031 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.1■□□□□ 0.81
CLPXO76031 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.1■□□□□ 0.81
CLPXO76031 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLPXO76031 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPXO76031 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPXO76031 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPXO76031 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLPXO76031 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLPXO76031 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CLPXO76031 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.09■□□□□ 0.81
CLPXO76031 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CLPXO76031 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 ECEL1P2-201ENST00000461596 1295 ntBASIC20.09■□□□□ 0.81
CLPXO76031 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CLPXO76031 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLPXO76031 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPXO76031 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPXO76031 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.08■□□□□ 0.81
CLPXO76031 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.08■□□□□ 0.81
CLPXO76031 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPXO76031 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLPXO76031 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.08■□□□□ 0.81
CLPXO76031 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.08■□□□□ 0.81
CLPXO76031 AC012354.3-201ENST00000623734 483 ntBASIC20.08■□□□□ 0.81
CLPXO76031 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLPXO76031 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
CLPXO76031 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLPXO76031 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLPXO76031 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CLPXO76031 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLPXO76031 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.07■□□□□ 0.8
CLPXO76031 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.07■□□□□ 0.8
CLPXO76031 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.07■□□□□ 0.8
CLPXO76031 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CLPXO76031 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.07■□□□□ 0.8
CLPXO76031 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLPXO76031 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPXO76031 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLPXO76031 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLPXO76031 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.06■□□□□ 0.8
CLPXO76031 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.06■□□□□ 0.8
CLPXO76031 AC025884.2-201ENST00000553429 711 ntBASIC20.06■□□□□ 0.8
CLPXO76031 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.06■□□□□ 0.8
CLPXO76031 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLPXO76031 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPXO76031 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLPXO76031 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLPXO76031 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLPXO76031 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLPXO76031 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CLPXO76031 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLPXO76031 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CLPXO76031 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLPXO76031 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CLPXO76031 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.05■□□□□ 0.8
CLPXO76031 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLPXO76031 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLPXO76031 SMPD5-203ENST00000639008 1464 ntBASIC20.05■□□□□ 0.8
CLPXO76031 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.04■□□□□ 0.8
CLPXO76031 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.04■□□□□ 0.8
CLPXO76031 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.04■□□□□ 0.8
CLPXO76031 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CLPXO76031 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLPXO76031 AC005229.4-201ENST00000610085 2198 ntBASIC20.04■□□□□ 0.8
CLPXO76031 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLPXO76031 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLPXO76031 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms