Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPK3AO75631 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.91■□□□□ 0.78
UPK3AO75631 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
UPK3AO75631 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
UPK3AO75631 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.91■□□□□ 0.78
UPK3AO75631 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.91■□□□□ 0.78
UPK3AO75631 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.91■□□□□ 0.78
UPK3AO75631 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.91■□□□□ 0.78
UPK3AO75631 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.91■□□□□ 0.78
UPK3AO75631 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UPK3AO75631 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UPK3AO75631 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UPK3AO75631 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.91■□□□□ 0.78
UPK3AO75631 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UPK3AO75631 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.91■□□□□ 0.78
UPK3AO75631 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.9■□□□□ 0.78
UPK3AO75631 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.9■□□□□ 0.78
UPK3AO75631 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.9■□□□□ 0.78
UPK3AO75631 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
UPK3AO75631 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.9■□□□□ 0.78
UPK3AO75631 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.9■□□□□ 0.78
UPK3AO75631 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UPK3AO75631 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.9■□□□□ 0.78
UPK3AO75631 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.89■□□□□ 0.77
UPK3AO75631 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.89■□□□□ 0.77
UPK3AO75631 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.89■□□□□ 0.77
UPK3AO75631 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.89■□□□□ 0.77
UPK3AO75631 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.89■□□□□ 0.77
UPK3AO75631 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
UPK3AO75631 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK3AO75631 CLDN5-201ENST00000403084 2357 ntBASIC19.88■□□□□ 0.77
UPK3AO75631 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK3AO75631 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK3AO75631 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
UPK3AO75631 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.88■□□□□ 0.77
UPK3AO75631 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK3AO75631 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
UPK3AO75631 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.88■□□□□ 0.77
UPK3AO75631 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
UPK3AO75631 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.88■□□□□ 0.77
UPK3AO75631 AC079630.1-202ENST00000618127 1840 ntBASIC19.88■□□□□ 0.77
UPK3AO75631 GUSBP5-202ENST00000510805 1989 ntBASIC19.87■□□□□ 0.77
UPK3AO75631 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.87■□□□□ 0.77
UPK3AO75631 AL512631.2-201ENST00000604634 923 ntBASIC19.87■□□□□ 0.77
UPK3AO75631 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.87■□□□□ 0.77
UPK3AO75631 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK3AO75631 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
UPK3AO75631 AC131281.2-201ENST00000520478 145 ntBASIC19.86■□□□□ 0.77
UPK3AO75631 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.86■□□□□ 0.77
UPK3AO75631 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.86■□□□□ 0.77
UPK3AO75631 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK3AO75631 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPK3AO75631 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK3AO75631 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.86■□□□□ 0.77
UPK3AO75631 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPK3AO75631 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.86■□□□□ 0.77
UPK3AO75631 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UPK3AO75631 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.85■□□□□ 0.77
UPK3AO75631 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 C17orf82-201ENST00000623772 1530 ntBASIC19.85■□□□□ 0.77
UPK3AO75631 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK3AO75631 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UPK3AO75631 LINC00526-201ENST00000581067 1875 ntBASIC19.84■□□□□ 0.77
UPK3AO75631 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK3AO75631 LINC00565-201ENST00000562710 2331 ntBASIC19.84■□□□□ 0.77
UPK3AO75631 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms