Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PPM1DO15297 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PPM1DO15297 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
PPM1DO15297 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.66■■□□□ 1.06
PPM1DO15297 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPM1DO15297 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.66■■□□□ 1.06
PPM1DO15297 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PPM1DO15297 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.66■■□□□ 1.06
PPM1DO15297 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.66■■□□□ 1.06
PPM1DO15297 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPM1DO15297 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.66■■□□□ 1.06
PPM1DO15297 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PPM1DO15297 LINC01529-204ENST00000636474 1715 ntBASIC21.66■■□□□ 1.06
PPM1DO15297 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.66■■□□□ 1.06
PPM1DO15297 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PPM1DO15297 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.65■■□□□ 1.06
PPM1DO15297 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PPM1DO15297 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.65■■□□□ 1.06
PPM1DO15297 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PPM1DO15297 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.65■■□□□ 1.06
PPM1DO15297 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PPM1DO15297 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PPM1DO15297 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPM1DO15297 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PPM1DO15297 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PPM1DO15297 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPM1DO15297 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
PPM1DO15297 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPM1DO15297 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.64■■□□□ 1.05
PPM1DO15297 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPM1DO15297 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PPM1DO15297 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.64■■□□□ 1.05
PPM1DO15297 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.64■■□□□ 1.05
PPM1DO15297 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.64■■□□□ 1.05
PPM1DO15297 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.64■■□□□ 1.05
PPM1DO15297 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.64■■□□□ 1.05
PPM1DO15297 MIR6821-201ENST00000617625 74 ntBASIC21.64■■□□□ 1.05
PPM1DO15297 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPM1DO15297 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.64■■□□□ 1.05
PPM1DO15297 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPM1DO15297 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
PPM1DO15297 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PPM1DO15297 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPM1DO15297 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PPM1DO15297 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.63■■□□□ 1.05
PPM1DO15297 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PPM1DO15297 AC097381.1-201ENST00000429019 1296 ntBASIC21.63■■□□□ 1.05
PPM1DO15297 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.63■■□□□ 1.05
PPM1DO15297 MIR5787-201ENST00000611784 55 ntBASIC21.63■■□□□ 1.05
PPM1DO15297 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.63■■□□□ 1.05
PPM1DO15297 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PPM1DO15297 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.63■■□□□ 1.05
PPM1DO15297 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.63■■□□□ 1.05
PPM1DO15297 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPM1DO15297 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PPM1DO15297 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PPM1DO15297 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPM1DO15297 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.62■■□□□ 1.05
PPM1DO15297 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PPM1DO15297 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPM1DO15297 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPM1DO15297 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPM1DO15297 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.62■■□□□ 1.05
PPM1DO15297 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.62■■□□□ 1.05
PPM1DO15297 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.62■■□□□ 1.05
PPM1DO15297 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 TSPY26P-201ENST00000476365 1326 ntBASIC21.61■■□□□ 1.05
PPM1DO15297 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.61■■□□□ 1.05
PPM1DO15297 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPM1DO15297 AC010525.1-201ENST00000585559 441 ntBASIC21.61■■□□□ 1.05
PPM1DO15297 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PPM1DO15297 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms