Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC027682.1-201ENST00000562846 899 ntBASIC23.87■■□□□ 1.41
SPTLC1O15269 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SPTLC1O15269 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
SPTLC1O15269 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPTLC1O15269 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPTLC1O15269 RASA4CP-201ENST00000424092 1398 ntBASIC23.87■■□□□ 1.41
SPTLC1O15269 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.87■■□□□ 1.41
SPTLC1O15269 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SPTLC1O15269 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.86■■□□□ 1.41
SPTLC1O15269 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SPTLC1O15269 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
SPTLC1O15269 BX842568.3-201ENST00000418104 571 ntBASIC23.86■■□□□ 1.41
SPTLC1O15269 SLC47A1P1-202ENST00000449666 945 ntBASIC23.86■■□□□ 1.41
SPTLC1O15269 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.86■■□□□ 1.41
SPTLC1O15269 AC233992.3-201ENST00000607491 485 ntBASIC23.86■■□□□ 1.41
SPTLC1O15269 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPTLC1O15269 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SPTLC1O15269 ANOS2P-203ENST00000472227 1816 ntBASIC23.84■■□□□ 1.41
SPTLC1O15269 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC1O15269 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC1O15269 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC1O15269 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SPTLC1O15269 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC1O15269 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.84■■□□□ 1.41
SPTLC1O15269 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.84■■□□□ 1.41
SPTLC1O15269 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.84■■□□□ 1.41
SPTLC1O15269 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SPTLC1O15269 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SPTLC1O15269 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPTLC1O15269 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SPTLC1O15269 AC010525.1-201ENST00000585559 441 ntBASIC23.83■■□□□ 1.41
SPTLC1O15269 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.83■■□□□ 1.4
SPTLC1O15269 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.83■■□□□ 1.4
SPTLC1O15269 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC1O15269 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC1O15269 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC1O15269 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.82■■□□□ 1.4
SPTLC1O15269 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SPTLC1O15269 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SPTLC1O15269 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.82■■□□□ 1.4
SPTLC1O15269 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.82■■□□□ 1.4
SPTLC1O15269 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC1O15269 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SPTLC1O15269 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC1O15269 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC1O15269 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SPTLC1O15269 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SPTLC1O15269 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC1O15269 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SPTLC1O15269 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.81■■□□□ 1.4
SPTLC1O15269 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC1O15269 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.81■■□□□ 1.4
SPTLC1O15269 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC1O15269 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SPTLC1O15269 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.81■■□□□ 1.4
SPTLC1O15269 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SPTLC1O15269 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
SPTLC1O15269 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.8■■□□□ 1.4
SPTLC1O15269 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC1O15269 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC1O15269 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC1O15269 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.8■■□□□ 1.4
SPTLC1O15269 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SPTLC1O15269 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SPTLC1O15269 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC1O15269 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC1O15269 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.79■■□□□ 1.4
SPTLC1O15269 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.79■■□□□ 1.4
SPTLC1O15269 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC1O15269 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SPTLC1O15269 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.79■■□□□ 1.4
SPTLC1O15269 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC1O15269 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.79■■□□□ 1.4
SPTLC1O15269 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC1O15269 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SPTLC1O15269 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC1O15269 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SPTLC1O15269 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SPTLC1O15269 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.78■■□□□ 1.4
SPTLC1O15269 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC1O15269 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC1O15269 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
SPTLC1O15269 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SPTLC1O15269 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.77■■□□□ 1.4
SPTLC1O15269 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC1O15269 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC1O15269 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC1O15269 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.77■■□□□ 1.4
SPTLC1O15269 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.77■■□□□ 1.4
SPTLC1O15269 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.77■■□□□ 1.4
SPTLC1O15269 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.77■■□□□ 1.4
SPTLC1O15269 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC1O15269 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC1O15269 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SPTLC1O15269 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SPTLC1O15269 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SPTLC1O15269 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.76■■□□□ 1.39
SPTLC1O15269 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SPTLC1O15269 AC092068.2-201ENST00000590491 1708 ntBASIC23.76■■□□□ 1.39
SPTLC1O15269 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms