Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMAD9O15198 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.05■□□□□ 0.8
SMAD9O15198 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.05■□□□□ 0.8
SMAD9O15198 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
SMAD9O15198 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMAD9O15198 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.05■□□□□ 0.8
SMAD9O15198 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
SMAD9O15198 ANOS2P-203ENST00000472227 1816 ntBASIC20.04■□□□□ 0.8
SMAD9O15198 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD9O15198 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD9O15198 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMAD9O15198 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.04■□□□□ 0.8
SMAD9O15198 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.04■□□□□ 0.8
SMAD9O15198 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMAD9O15198 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD9O15198 AC144652.1-201ENST00000609974 1624 ntBASIC20.04■□□□□ 0.8
SMAD9O15198 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMAD9O15198 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMAD9O15198 AC012676.1-201ENST00000574705 1949 ntBASIC20.04■□□□□ 0.8
SMAD9O15198 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.03■□□□□ 0.8
SMAD9O15198 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.03■□□□□ 0.8
SMAD9O15198 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD9O15198 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD9O15198 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.03■□□□□ 0.8
SMAD9O15198 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.03■□□□□ 0.8
SMAD9O15198 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.03■□□□□ 0.8
SMAD9O15198 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD9O15198 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMAD9O15198 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMAD9O15198 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD9O15198 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMAD9O15198 AC099791.2-201ENST00000605725 427 ntBASIC20.02■□□□□ 0.8
SMAD9O15198 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.02■□□□□ 0.8
SMAD9O15198 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMAD9O15198 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMAD9O15198 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMAD9O15198 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMAD9O15198 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SMAD9O15198 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.01■□□□□ 0.79
SMAD9O15198 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
SMAD9O15198 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.01■□□□□ 0.79
SMAD9O15198 AC241377.3-202ENST00000626088 1088 ntBASIC20.01■□□□□ 0.79
SMAD9O15198 AC241585.3-202ENST00000628937 1088 ntBASIC20.01■□□□□ 0.79
SMAD9O15198 AC245100.8-202ENST00000629247 1058 ntBASIC20.01■□□□□ 0.79
SMAD9O15198 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SMAD9O15198 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMAD9O15198 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMAD9O15198 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMAD9O15198 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMAD9O15198 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20■□□□□ 0.79
SMAD9O15198 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMAD9O15198 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SMAD9O15198 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20■□□□□ 0.79
SMAD9O15198 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SMAD9O15198 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SMAD9O15198 AC092068.2-201ENST00000590491 1708 ntBASIC19.99■□□□□ 0.79
SMAD9O15198 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 FP325331.1-202ENST00000623531 1380 ntBASIC19.99■□□□□ 0.79
SMAD9O15198 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMAD9O15198 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.99■□□□□ 0.79
SMAD9O15198 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 AC006455.2-201ENST00000429931 906 ntBASIC19.99■□□□□ 0.79
SMAD9O15198 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.99■□□□□ 0.79
SMAD9O15198 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.99■□□□□ 0.79
SMAD9O15198 AC009086.3-201ENST00000623486 1008 ntBASIC19.99■□□□□ 0.79
SMAD9O15198 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.99■□□□□ 0.79
SMAD9O15198 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.99■□□□□ 0.79
SMAD9O15198 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SMAD9O15198 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SMAD9O15198 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.98■□□□□ 0.79
SMAD9O15198 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SMAD9O15198 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.98■□□□□ 0.79
SMAD9O15198 AC092171.4-201ENST00000609130 632 ntBASIC19.98■□□□□ 0.79
SMAD9O15198 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms