Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHD2O14647 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CHD2O14647 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
CHD2O14647 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CHD2O14647 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
CHD2O14647 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHD2O14647 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHD2O14647 HLA-L-211ENST00000482052 1765 ntBASIC31.53■■■□□ 2.64
CHD2O14647 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CHD2O14647 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHD2O14647 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CHD2O14647 FP325331.1-202ENST00000623531 1380 ntBASIC31.52■■■□□ 2.64
CHD2O14647 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC31.52■■■□□ 2.64
CHD2O14647 DUX4L4-201ENST00000566884 1269 ntBASIC31.52■■■□□ 2.64
CHD2O14647 AC142086.2-201ENST00000569753 217 ntBASIC31.52■■■□□ 2.64
CHD2O14647 AL050303.2-201ENST00000619798 666 ntBASIC31.52■■■□□ 2.64
CHD2O14647 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CHD2O14647 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.52■■■□□ 2.64
CHD2O14647 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.52■■■□□ 2.64
CHD2O14647 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.52■■■□□ 2.64
CHD2O14647 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC31.52■■■□□ 2.64
CHD2O14647 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.51■■■□□ 2.63
CHD2O14647 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.51■■■□□ 2.63
CHD2O14647 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.51■■■□□ 2.63
CHD2O14647 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHD2O14647 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHD2O14647 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHD2O14647 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.5■■■□□ 2.63
CHD2O14647 DUSP8P4-201ENST00000399538 1761 ntBASIC31.5■■■□□ 2.63
CHD2O14647 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.5■■■□□ 2.63
CHD2O14647 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CHD2O14647 KRT19P1-201ENST00000405746 1186 ntBASIC31.49■■■□□ 2.63
CHD2O14647 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHD2O14647 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHD2O14647 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
CHD2O14647 GUSBP6-202ENST00000438529 1198 ntBASIC31.48■■■□□ 2.63
CHD2O14647 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.48■■■□□ 2.63
CHD2O14647 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHD2O14647 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CHD2O14647 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CHD2O14647 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
CHD2O14647 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.47■■■□□ 2.63
CHD2O14647 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC31.47■■■□□ 2.63
CHD2O14647 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.47■■■□□ 2.63
CHD2O14647 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.47■■■□□ 2.63
CHD2O14647 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.47■■■□□ 2.63
CHD2O14647 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.47■■■□□ 2.63
CHD2O14647 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHD2O14647 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHD2O14647 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHD2O14647 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.46■■■□□ 2.63
CHD2O14647 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC31.46■■■□□ 2.63
CHD2O14647 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHD2O14647 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHD2O14647 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.45■■■□□ 2.63
CHD2O14647 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHD2O14647 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHD2O14647 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHD2O14647 SLC7A5P2-201ENST00000553010 536 ntBASIC31.45■■■□□ 2.63
CHD2O14647 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC31.45■■■□□ 2.63
CHD2O14647 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.45■■■□□ 2.63
CHD2O14647 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHD2O14647 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.62
CHD2O14647 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CHD2O14647 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CHD2O14647 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHD2O14647 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.44■■■□□ 2.62
CHD2O14647 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
CHD2O14647 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.44■■■□□ 2.62
CHD2O14647 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.44■■■□□ 2.62
CHD2O14647 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
CHD2O14647 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CHD2O14647 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.44■■■□□ 2.62
CHD2O14647 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.44■■■□□ 2.62
CHD2O14647 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD2O14647 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD2O14647 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.43■■■□□ 2.62
CHD2O14647 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.43■■■□□ 2.62
CHD2O14647 CD99P1-205ENST00000527459 561 ntBASIC31.43■■■□□ 2.62
CHD2O14647 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CHD2O14647 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHD2O14647 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD2O14647 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC31.43■■■□□ 2.62
CHD2O14647 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHD2O14647 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.43■■■□□ 2.62
CHD2O14647 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHD2O14647 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHD2O14647 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms