Protein–RNA interactions for Protein: O00213

APBB1, Amyloid-beta A4 precursor protein-binding family B member 1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB1O00213 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
APBB1O00213 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
APBB1O00213 LINC01529-204ENST00000636474 1715 ntBASIC27.65■■■□□ 2.02
APBB1O00213 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
APBB1O00213 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
APBB1O00213 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
APBB1O00213 AC006455.2-201ENST00000429931 906 ntBASIC27.65■■■□□ 2.02
APBB1O00213 AC099791.2-201ENST00000605725 427 ntBASIC27.65■■■□□ 2.02
APBB1O00213 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.65■■■□□ 2.02
APBB1O00213 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.65■■■□□ 2.02
APBB1O00213 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.65■■■□□ 2.02
APBB1O00213 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
APBB1O00213 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
APBB1O00213 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.64■■■□□ 2.02
APBB1O00213 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC27.64■■■□□ 2.02
APBB1O00213 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
APBB1O00213 AC068473.5-201ENST00000616428 2072 ntBASIC27.64■■■□□ 2.01
APBB1O00213 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.64■■■□□ 2.01
APBB1O00213 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.64■■■□□ 2.01
APBB1O00213 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.63■■■□□ 2.01
APBB1O00213 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.63■■■□□ 2.01
APBB1O00213 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
APBB1O00213 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.63■■■□□ 2.01
APBB1O00213 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.63■■■□□ 2.01
APBB1O00213 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.63■■■□□ 2.01
APBB1O00213 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.63■■■□□ 2.01
APBB1O00213 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
APBB1O00213 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
APBB1O00213 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
APBB1O00213 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
APBB1O00213 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
APBB1O00213 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
APBB1O00213 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
APBB1O00213 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
APBB1O00213 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
APBB1O00213 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
APBB1O00213 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.62■■■□□ 2.01
APBB1O00213 AL136116.3-201ENST00000402907 1138 ntBASIC27.61■■■□□ 2.01
APBB1O00213 SRD5A1P1-201ENST00000442297 786 ntBASIC27.61■■■□□ 2.01
APBB1O00213 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
APBB1O00213 C1orf229-201ENST00000623686 2258 ntBASIC27.61■■■□□ 2.01
APBB1O00213 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
APBB1O00213 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC27.6■■■□□ 2.01
APBB1O00213 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
APBB1O00213 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
APBB1O00213 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
APBB1O00213 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.6■■■□□ 2.01
APBB1O00213 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
APBB1O00213 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
APBB1O00213 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
APBB1O00213 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.59■■■□□ 2.01
APBB1O00213 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
APBB1O00213 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC27.59■■■□□ 2.01
APBB1O00213 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
APBB1O00213 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
APBB1O00213 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
APBB1O00213 AC019069.1-201ENST00000610008 1333 ntBASIC27.59■■■□□ 2.01
APBB1O00213 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.59■■■□□ 2.01
APBB1O00213 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
APBB1O00213 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.58■■■□□ 2.01
APBB1O00213 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.58■■■□□ 2.01
APBB1O00213 GALC-202ENST00000393568 2054 ntTSL 2 BASIC27.58■■■□□ 2.01
APBB1O00213 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.58■■■□□ 2.01
APBB1O00213 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.58■■■□□ 2.01
APBB1O00213 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
APBB1O00213 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
APBB1O00213 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.58■■■□□ 2.01
APBB1O00213 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
APBB1O00213 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.57■■■□□ 2
APBB1O00213 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.57■■■□□ 2
APBB1O00213 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 AC009086.3-201ENST00000623486 1008 ntBASIC27.57■■■□□ 2
APBB1O00213 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.57■■■□□ 2
APBB1O00213 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.57■■■□□ 2
APBB1O00213 AC008406.3-201ENST00000620001 1374 ntBASIC27.57■■■□□ 2
APBB1O00213 FP325331.1-202ENST00000623531 1380 ntBASIC27.57■■■□□ 2
APBB1O00213 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
APBB1O00213 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
APBB1O00213 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
APBB1O00213 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
APBB1O00213 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.56■■■□□ 2
APBB1O00213 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms