Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 BX842568.3-201ENST00000418104 571 ntBASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPA2E9PIF3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 MIR5787-201ENST00000611784 55 ntBASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
NPIPA2E9PIF3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 IRS3P-201ENST00000223076 1006 ntBASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPA2E9PIF3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPA2E9PIF3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 AC126544.1-201ENST00000580842 1059 ntBASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPA2E9PIF3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
NPIPA2E9PIF3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPA2E9PIF3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.15■□□□□ 0.82
NPIPA2E9PIF3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.15■□□□□ 0.82
NPIPA2E9PIF3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
NPIPA2E9PIF3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPIPA2E9PIF3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NPIPA2E9PIF3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 AC092666.2-201ENST00000613287 246 ntBASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NPIPA2E9PIF3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms