Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.12■□□□□ 0.17
NACAE9PAV3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.12■□□□□ 0.17
NACAE9PAV3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
NACAE9PAV3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.11■□□□□ 0.17
NACAE9PAV3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.11■□□□□ 0.17
NACAE9PAV3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
NACAE9PAV3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.11■□□□□ 0.17
NACAE9PAV3 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.11■□□□□ 0.17
NACAE9PAV3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.11■□□□□ 0.17
NACAE9PAV3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NACAE9PAV3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NACAE9PAV3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.1■□□□□ 0.17
NACAE9PAV3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NACAE9PAV3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.1■□□□□ 0.17
NACAE9PAV3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NACAE9PAV3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NACAE9PAV3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NACAE9PAV3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.1■□□□□ 0.17
NACAE9PAV3 AC233723.2-201ENST00000623798 2106 ntBASIC16.1■□□□□ 0.17
NACAE9PAV3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NACAE9PAV3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.1■□□□□ 0.17
NACAE9PAV3 TSPY9P-201ENST00000440215 945 ntBASIC16.1■□□□□ 0.17
NACAE9PAV3 TSPY11P-201ENST00000442607 1045 ntBASIC16.1■□□□□ 0.17
NACAE9PAV3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.1■□□□□ 0.17
NACAE9PAV3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.1■□□□□ 0.17
NACAE9PAV3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.1■□□□□ 0.17
NACAE9PAV3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NACAE9PAV3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NACAE9PAV3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NACAE9PAV3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.09■□□□□ 0.17
NACAE9PAV3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.09■□□□□ 0.17
NACAE9PAV3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NACAE9PAV3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
NACAE9PAV3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.09■□□□□ 0.17
NACAE9PAV3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NACAE9PAV3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NACAE9PAV3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 MTDHP2-201ENST00000601468 714 ntBASIC16.08■□□□□ 0.16
NACAE9PAV3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.08■□□□□ 0.16
NACAE9PAV3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.08■□□□□ 0.16
NACAE9PAV3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.08■□□□□ 0.16
NACAE9PAV3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NACAE9PAV3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
NACAE9PAV3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NACAE9PAV3 C1orf229-201ENST00000623686 2258 ntBASIC16.08■□□□□ 0.16
NACAE9PAV3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.07■□□□□ 0.16
NACAE9PAV3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 AC004448.1-201ENST00000458332 883 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.07■□□□□ 0.16
NACAE9PAV3 MIR6724-1-201ENST00000616420 92 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 MIR6724-2-201ENST00000616483 92 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 MIR6724-4-201ENST00000617390 92 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 MIR6724-3-201ENST00000622482 92 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.07■□□□□ 0.16
NACAE9PAV3 AC008406.3-201ENST00000620001 1374 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.07■□□□□ 0.16
NACAE9PAV3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.07■□□□□ 0.16
NACAE9PAV3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.07■□□□□ 0.16
NACAE9PAV3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.07■□□□□ 0.16
NACAE9PAV3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NACAE9PAV3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.07■□□□□ 0.16
NACAE9PAV3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.07■□□□□ 0.16
NACAE9PAV3 AL117332.1-201ENST00000622628 974 ntBASIC16.07■□□□□ 0.16
NACAE9PAV3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NACAE9PAV3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.06■□□□□ 0.16
NACAE9PAV3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NACAE9PAV3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NACAE9PAV3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NACAE9PAV3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NACAE9PAV3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NACAE9PAV3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.06■□□□□ 0.16
NACAE9PAV3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NACAE9PAV3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NACAE9PAV3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms