Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRGV4A0A0C4DH28 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 KRT16P3-201ENST00000439127 1283 ntBASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 DUSP8P3-201ENST00000399571 1760 ntBASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRGV4A0A0C4DH28 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.88■□□□□ 0.13
TRGV4A0A0C4DH28 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 MIR6724-1-201ENST00000616420 92 ntBASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 MIR6724-2-201ENST00000616483 92 ntBASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 MIR6724-4-201ENST00000617390 92 ntBASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 MIR6724-3-201ENST00000622482 92 ntBASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRGV4A0A0C4DH28 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 UNC93B8-201ENST00000511903 705 ntBASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 AC144652.1-201ENST00000609974 1624 ntBASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRGV4A0A0C4DH28 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 C9orf163-202ENST00000624034 2573 ntBASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRGV4A0A0C4DH28 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms