Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 AC144652.1-201ENST00000609974 1624 ntBASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 AC239859.2-201ENST00000444165 318 ntBASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 AC009299.2-201ENST00000482477 511 ntBASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV4A0A0B4J268 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 AL353803.4-201ENST00000565882 1934 ntBASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV4A0A0B4J268 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV4A0A0B4J268 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 AL451085.2-201ENST00000605085 799 ntBASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 AC010997.5-201ENST00000609182 354 ntBASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 SLC25A24-204ENST00000569674 2357 ntBASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRAV4A0A0B4J268 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV4A0A0B4J268 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms