Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 SRD5A1P1-201ENST00000442297 786 ntBASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV2A0A0B4J234 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 AL512631.2-201ENST00000604634 923 ntBASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 AC009086.3-201ENST00000623486 1008 ntBASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV2A0A0B4J234 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV2A0A0B4J234 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV2A0A0B4J234 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 AL353803.4-201ENST00000565882 1934 ntBASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV2A0A0B4J234 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 DUX4L19-201ENST00000557448 1267 ntBASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV2A0A0B4J234 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV2A0A0B4J234 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms