Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV7-1A0A0A6YYK4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 AC092171.4-201ENST00000609130 632 ntBASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
TRBV7-1A0A0A6YYK4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 C9orf163-202ENST00000624034 2573 ntBASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SRD5A1P1-201ENST00000442297 786 ntBASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV7-1A0A0A6YYK4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV7-1A0A0A6YYK4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV7-1A0A0A6YYK4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ESRRAP2-201ENST00000418437 1549 ntBASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV7-1A0A0A6YYK4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV7-1A0A0A6YYK4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms