Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 BX664725.1-201ENST00000438252 379 ntBASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 MIR4281-201ENST00000580852 62 ntBASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-3A0A0A6YYJ7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 DUSP8P3-201ENST00000399571 1760 ntBASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC007375.3-201ENST00000600936 2314 ntBASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 KRT125P-201ENST00000546827 989 ntBASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 Z92544.1-202ENST00000571933 1220 ntBASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC137630.3-201ENST00000607245 391 ntBASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms