Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 AC005703.6-201ENST00000623265 1329 ntBASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV30A0A087WSZ9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV30A0A087WSZ9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
TRAV30A0A087WSZ9 AL353803.4-201ENST00000565882 1934 ntBASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 AC144652.1-201ENST00000609974 1624 ntBASIC17.39■□□□□ 0.37
TRAV30A0A087WSZ9 C1orf229-201ENST00000623686 2258 ntBASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 AC021242.3-201ENST00000607598 1377 ntBASIC17.38■□□□□ 0.37
TRAV30A0A087WSZ9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV30A0A087WSZ9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 FP325331.1-202ENST00000623531 1380 ntBASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV30A0A087WSZ9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV30A0A087WSZ9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV30A0A087WSZ9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms