Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
PARPBPQ9NWS1 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 RPL3P2-204ENST00000413027 1203 ntBASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 EEF1DP2-201ENST00000433698 843 ntBASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC078991.1-201ENST00000437297 610 ntBASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC079112.1-201ENST00000454972 939 ntBASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 RN7SL375P-201ENST00000492442 298 ntBASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AC084781.1-201ENST00000613737 656 ntBASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.27□□□□□ -0.45
PARPBPQ9NWS1 AL118506.1-201ENST00000601296 3082 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AC010336.1-201ENST00000539278 4739 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 GGTLC4P-201ENST00000402176 664 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 OR52M2P-201ENST00000414298 959 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 KRT18P62-201ENST00000446618 1287 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AC100858.1-201ENST00000514059 1228 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AP000911.2-201ENST00000534330 502 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 AC007881.3-201ENST00000608897 607 ntBASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
PARPBPQ9NWS1 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms