Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 HIST2H2BA-201ENST00000412169 381 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 AC079112.1-201ENST00000454972 939 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 RPS2P36-201ENST00000456516 831 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDN20P56880 RPL18AP3-201ENST00000462885 528 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CLDN20P56880 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDN20P56880 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 KRT8P2-201ENST00000556193 944 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 AP005264.5-201ENST00000590066 467 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 AP000322.3-201ENST00000608665 388 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 AC091769.1-201ENST00000619576 568 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 AL139424.3-202ENST00000641619 917 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 AC092053.3-201ENST00000641308 4975 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.54□□□□□ -0.4
CLDN20P56880 AC005014.1-201ENST00000432006 2976 ntBASIC12.54□□□□□ -0.4
CLDN20P56880 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.54□□□□□ -0.4
CLDN20P56880 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.54□□□□□ -0.4
CLDN20P56880 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CLDN20P56880 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CLDN20P56880 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDN20P56880 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.53□□□□□ -0.4
CLDN20P56880 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.53□□□□□ -0.4
CLDN20P56880 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.53□□□□□ -0.4
CLDN20P56880 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.53□□□□□ -0.4
CLDN20P56880 AP000911.2-201ENST00000534330 502 ntBASIC12.53□□□□□ -0.4
CLDN20P56880 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDN20P56880 AC007952.4-201ENST00000573866 637 ntBASIC12.53□□□□□ -0.4
CLDN20P56880 AC005041.3-201ENST00000606287 649 ntBASIC12.53□□□□□ -0.4
CLDN20P56880 AC007250.1-201ENST00000608934 338 ntBASIC12.53□□□□□ -0.4
CLDN20P56880 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLDN20P56880 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLDN20P56880 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.53□□□□□ -0.4
CLDN20P56880 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.53□□□□□ -0.4
CLDN20P56880 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLDN20P56880 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.53□□□□□ -0.4
CLDN20P56880 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CLDN20P56880 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.52□□□□□ -0.4
CLDN20P56880 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CLDN20P56880 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms