Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NVL-201ENST00000281701 3123 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 AL118508.3-201ENST00000623468 1854 ntBASIC11.46□□□□□ -0.57
NKX2-5P52952 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 AC053503.6-201ENST00000623864 1843 ntBASIC11.46□□□□□ -0.57
NKX2-5P52952 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 RHD-201ENST00000328664 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC11.46□□□□□ -0.57
NKX2-5P52952 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 BRF2-201ENST00000220659 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 HNRNPLP1-201ENST00000421896 1501 ntBASIC11.46□□□□□ -0.57
NKX2-5P52952 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC11.46□□□□□ -0.57
NKX2-5P52952 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 SPIN3-223ENST00000639525 3958 ntTSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.46□□□□□ -0.57
NKX2-5P52952 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 IGHV3-62-201ENST00000520057 340 ntBASIC11.46□□□□□ -0.57
NKX2-5P52952 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC11.46□□□□□ -0.57
NKX2-5P52952 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.46□□□□□ -0.57
NKX2-5P52952 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.46□□□□□ -0.57
NKX2-5P52952 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.46□□□□□ -0.57
NKX2-5P52952 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.46□□□□□ -0.57
NKX2-5P52952 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 AC138696.2-201ENST00000607376 223 ntBASIC11.46□□□□□ -0.57
NKX2-5P52952 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.46□□□□□ -0.57
NKX2-5P52952 GAPDHP72-202ENST00000636791 2141 ntTSL 5 BASIC11.46□□□□□ -0.57
NKX2-5P52952 WBP11-201ENST00000261167 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 SCN4B-201ENST00000324727 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
NKX2-5P52952 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NKX2-5P52952 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC11.46□□□□□ -0.58
NKX2-5P52952 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NKX2-5P52952 AC068473.3-202ENST00000589723 4167 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NKX2-5P52952 NDUFAF7-202ENST00000336237 1869 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
NKX2-5P52952 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC11.46□□□□□ -0.58
NKX2-5P52952 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
NKX2-5P52952 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NKX2-5P52952 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
NKX2-5P52952 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NKX2-5P52952 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.46□□□□□ -0.58
NKX2-5P52952 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.46□□□□□ -0.58
NKX2-5P52952 TRPC7-206ENST00000513104 2987 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
NKX2-5P52952 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC11.45□□□□□ -0.58
NKX2-5P52952 UXT-AS1-201ENST00000590504 1525 ntBASIC11.45□□□□□ -0.58
NKX2-5P52952 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.45□□□□□ -0.58
NKX2-5P52952 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
NKX2-5P52952 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 AL139274.2-201ENST00000606274 4127 ntBASIC11.45□□□□□ -0.58
NKX2-5P52952 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 AC080112.4-201ENST00000623156 2491 ntBASIC11.45□□□□□ -0.58
NKX2-5P52952 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC11.45□□□□□ -0.58
NKX2-5P52952 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 LINC01600-201ENST00000624527 2434 ntTSL 2 BASIC11.45□□□□□ -0.58
NKX2-5P52952 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.45□□□□□ -0.58
NKX2-5P52952 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC11.45□□□□□ -0.58
NKX2-5P52952 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 ZNF304-204ENST00000598744 3331 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
NKX2-5P52952 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC11.45□□□□□ -0.58
NKX2-5P52952 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
NKX2-5P52952 AC092910.1-201ENST00000482027 1129 ntBASIC11.45□□□□□ -0.58
NKX2-5P52952 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.45□□□□□ -0.58
NKX2-5P52952 NT5C-211ENST00000582170 653 ntTSL 3 BASIC11.45□□□□□ -0.58
NKX2-5P52952 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms