Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.7□□□□□ -0.22
APOA4P06727 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA4P06727 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA4P06727 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.7□□□□□ -0.22
APOA4P06727 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
APOA4P06727 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA4P06727 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOA4P06727 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC13.7□□□□□ -0.22
APOA4P06727 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOA4P06727 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.69□□□□□ -0.22
APOA4P06727 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 AC006372.4-201ENST00000624122 1543 ntBASIC13.69□□□□□ -0.22
APOA4P06727 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA4P06727 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
APOA4P06727 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.69□□□□□ -0.22
APOA4P06727 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
APOA4P06727 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
APOA4P06727 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.69□□□□□ -0.22
APOA4P06727 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 AC005722.1-201ENST00000431878 964 ntBASIC13.69□□□□□ -0.22
APOA4P06727 AC234782.1-201ENST00000451950 919 ntBASIC13.69□□□□□ -0.22
APOA4P06727 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.69□□□□□ -0.22
APOA4P06727 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA4P06727 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.69□□□□□ -0.22
APOA4P06727 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.69□□□□□ -0.22
APOA4P06727 MIR4265-201ENST00000582152 99 ntBASIC13.69□□□□□ -0.22
APOA4P06727 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.69□□□□□ -0.22
APOA4P06727 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 AC007718.1-201ENST00000621078 280 ntBASIC13.69□□□□□ -0.22
APOA4P06727 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.69□□□□□ -0.22
APOA4P06727 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA4P06727 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.69□□□□□ -0.22
APOA4P06727 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
APOA4P06727 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
APOA4P06727 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.68□□□□□ -0.22
APOA4P06727 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.68□□□□□ -0.22
APOA4P06727 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
APOA4P06727 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
APOA4P06727 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 MIR1307-201ENST00000408840 149 ntBASIC13.68□□□□□ -0.22
APOA4P06727 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.68□□□□□ -0.22
APOA4P06727 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.68□□□□□ -0.22
APOA4P06727 SCARNA12-201ENST00000459155 270 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms