Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AP001180.5-201ENST00000581948 730 ntBASIC20.24■□□□□ 0.83
RIMBP3Q9UFD9 AC243830.1-201ENST00000610398 455 ntTSL 3 BASIC20.24■□□□□ 0.83
RIMBP3Q9UFD9 KRTAP4-7-202ENST00000621138 423 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RIMBP3Q9UFD9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.24■□□□□ 0.83
RIMBP3Q9UFD9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 PRG2-204ENST00000533605 1350 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 KRTAP20-1-201ENST00000334664 275 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC113340.1-201ENST00000475257 636 ntBASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 DUBR-204ENST00000490441 1149 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 MARCH3-205ENST00000515241 719 ntTSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 ALG1L13P-201ENST00000518201 521 ntTSL 5 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC074052.1-201ENST00000567734 456 ntBASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 MIR4688-201ENST00000577966 83 ntBASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 RN7SL275P-201ENST00000582762 335 ntBASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC010618.3-204ENST00000615939 751 ntBASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 AC137936.2-201ENST00000636329 620 ntBASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RIMBP3Q9UFD9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 FTO-214ENST00000636218 2227 ntTSL 5 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 SUN5-202ENST00000375519 513 ntTSL 2 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 AC113174.1-201ENST00000433897 105 ntBASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 AC008073.2-202ENST00000438414 674 ntTSL 3 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 CCDC58-205ENST00000479899 545 ntTSL 3 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 IFITM9P-201ENST00000535743 396 ntBASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 FKBP1AP2-201ENST00000560953 283 ntBASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 HKR1-206ENST00000586897 510 ntTSL 4 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 AC005736.1-201ENST00000576810 1394 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.22■□□□□ 0.83
RIMBP3Q9UFD9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 MLIP-202ENST00000370876 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 AC079154.1-201ENST00000438816 542 ntTSL 4 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 CCT6P1-203ENST00000443108 1170 ntTSL 2 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 MIR4721-201ENST00000577590 89 ntBASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 GABPB1-210ENST00000560825 1412 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 SMTNL1-201ENST00000399154 1536 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC20.21■□□□□ 0.83
RIMBP3Q9UFD9 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 METTL1-201ENST00000257848 1096 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC009948.2-201ENST00000437039 713 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC009502.2-201ENST00000452903 766 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 KRT42P-203ENST00000458343 671 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 RN7SL748P-201ENST00000483066 311 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 Metazoa_SRP.160-201ENST00000622203 277 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AC243547.3-202ENST00000625258 192 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 AL034548.1-201ENST00000608495 1672 ntBASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 CLIC1-207ENST00000375780 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RIMBP3Q9UFD9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms