Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 AC092117.1-201ENST00000621230 3250 ntBASIC11.11□□□□□ -0.63
RAB40CQ96S21 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
RAB40CQ96S21 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
RAB40CQ96S21 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 FAM90A17P-201ENST00000533716 1957 ntBASIC11.1□□□□□ -0.63
RAB40CQ96S21 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 AC090114.2-201ENST00000608477 7054 ntBASIC11.1□□□□□ -0.63
RAB40CQ96S21 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 PAM-203ENST00000346918 3302 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 DNM1P51-201ENST00000558149 522 ntBASIC11.1□□□□□ -0.63
RAB40CQ96S21 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 AC244669.2-201ENST00000612320 853 ntBASIC11.1□□□□□ -0.63
RAB40CQ96S21 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 RCC2P5-201ENST00000492126 1487 ntBASIC11.1□□□□□ -0.63
RAB40CQ96S21 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
RAB40CQ96S21 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
RAB40CQ96S21 AC063926.2-201ENST00000623766 1308 ntBASIC11.09□□□□□ -0.63
RAB40CQ96S21 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RAB40CQ96S21 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.09□□□□□ -0.63
RAB40CQ96S21 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms