Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.2□□□□□ -0.46
ZIC3O60481 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.2□□□□□ -0.46
ZIC3O60481 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 AC136604.1-202ENST00000425471 771 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC12.2□□□□□ -0.46
ZIC3O60481 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 ALG1L3P-201ENST00000503331 765 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.2□□□□□ -0.46
ZIC3O60481 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.2□□□□□ -0.46
ZIC3O60481 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
ZIC3O60481 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 AC073592.2-201ENST00000623062 780 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 AC005274.1-201ENST00000623460 802 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.2□□□□□ -0.46
ZIC3O60481 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 AC091807.1-201ENST00000418838 1544 ntBASIC12.2□□□□□ -0.46
ZIC3O60481 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.2□□□□□ -0.46
ZIC3O60481 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZIC3O60481 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.2□□□□□ -0.46
ZIC3O60481 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZIC3O60481 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 AC002350.2-201ENST00000623894 1828 ntBASIC12.19□□□□□ -0.46
ZIC3O60481 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ZIC3O60481 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 PGK1P2-201ENST00000431702 1214 ntBASIC12.19□□□□□ -0.46
ZIC3O60481 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC12.19□□□□□ -0.46
ZIC3O60481 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC12.19□□□□□ -0.46
ZIC3O60481 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.19□□□□□ -0.46
ZIC3O60481 AP005264.6-204ENST00000588436 719 ntBASIC12.19□□□□□ -0.46
ZIC3O60481 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.19□□□□□ -0.46
ZIC3O60481 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.19□□□□□ -0.46
ZIC3O60481 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.19□□□□□ -0.46
ZIC3O60481 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZIC3O60481 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZIC3O60481 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 RBM22P2-201ENST00000393978 1814 ntBASIC12.18□□□□□ -0.46
ZIC3O60481 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZIC3O60481 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ZIC3O60481 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms