Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.55□□□□□ -0.08
O00370 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
O00370 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
O00370 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 AC012531.1-201ENST00000562848 2680 ntBASIC14.55□□□□□ -0.08
O00370 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.55□□□□□ -0.08
O00370 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.55□□□□□ -0.08
O00370 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.55□□□□□ -0.08
O00370 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
O00370 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
O00370 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.54□□□□□ -0.08
O00370 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
O00370 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.54□□□□□ -0.08
O00370 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.54□□□□□ -0.08
O00370 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.54□□□□□ -0.08
O00370 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
O00370 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.54□□□□□ -0.08
O00370 KRT18P62-201ENST00000446618 1287 ntBASIC14.54□□□□□ -0.08
O00370 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
O00370 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.54□□□□□ -0.08
O00370 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
O00370 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.54□□□□□ -0.08
O00370 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.54□□□□□ -0.08
O00370 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.54□□□□□ -0.08
O00370 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.54□□□□□ -0.08
O00370 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.54□□□□□ -0.08
O00370 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
O00370 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
O00370 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 AC007336.3-201ENST00000623886 2160 ntBASIC14.54□□□□□ -0.08
O00370 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
O00370 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.54□□□□□ -0.08
O00370 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.54□□□□□ -0.08
O00370 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
O00370 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
O00370 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
O00370 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.53□□□□□ -0.08
O00370 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.53□□□□□ -0.08
O00370 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 AC073862.5-201ENST00000624129 2027 ntBASIC14.53□□□□□ -0.08
O00370 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.53□□□□□ -0.08
O00370 MIR33B-201ENST00000385104 96 ntBASIC14.53□□□□□ -0.08
O00370 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC14.53□□□□□ -0.08
O00370 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.53□□□□□ -0.08
O00370 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.53□□□□□ -0.08
O00370 AC098935.1-201ENST00000446057 611 ntBASIC14.53□□□□□ -0.08
O00370 AC006529.1-201ENST00000459978 637 ntBASIC14.53□□□□□ -0.08
O00370 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.53□□□□□ -0.08
O00370 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.53□□□□□ -0.08
O00370 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
O00370 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
O00370 CR383656.3-201ENST00000551315 183 ntBASIC14.53□□□□□ -0.08
O00370 AC135983.4-201ENST00000564116 1262 ntBASIC14.53□□□□□ -0.08
O00370 MIR8071-1-201ENST00000616769 65 ntBASIC14.53□□□□□ -0.08
O00370 MIR8071-2-201ENST00000616772 65 ntBASIC14.53□□□□□ -0.08
O00370 AC011491.1-203ENST00000637688 543 ntBASIC14.53□□□□□ -0.08
O00370 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
O00370 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
O00370 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms