Protein–RNA interactions for Protein: Q9UBR5

CKLF, Chemokine-like factor, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKLFQ9UBR5 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.02□□□□□ -0.49
CKLFQ9UBR5 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 NRADDP-202ENST00000641269 1585 ntBASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AC040160.2-201ENST00000623816 1675 ntBASIC12.01□□□□□ -0.49
CKLFQ9UBR5 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 YBX1P6-201ENST00000442962 1002 ntBASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 RN7SL455P-201ENST00000580629 282 ntBASIC12.01□□□□□ -0.49
CKLFQ9UBR5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AP001462.1-201ENST00000594089 452 ntBASIC12.01□□□□□ -0.49
CKLFQ9UBR5 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AC022497.1-201ENST00000624916 3691 ntBASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CKLFQ9UBR5 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC12□□□□□ -0.49
CKLFQ9UBR5 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12□□□□□ -0.49
CKLFQ9UBR5 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CKLFQ9UBR5 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 GDA-203ENST00000376986 1771 ntTSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
CKLFQ9UBR5 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
CKLFQ9UBR5 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12□□□□□ -0.49
CKLFQ9UBR5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12□□□□□ -0.49
CKLFQ9UBR5 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12□□□□□ -0.49
CKLFQ9UBR5 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12□□□□□ -0.49
CKLFQ9UBR5 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12□□□□□ -0.49
CKLFQ9UBR5 RNMTL1P1-201ENST00000454103 560 ntBASIC12□□□□□ -0.49
CKLFQ9UBR5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12□□□□□ -0.49
CKLFQ9UBR5 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms