Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
SCN2BO60939 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SCN2BO60939 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.96□□□□□ -0.34
SCN2BO60939 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.96□□□□□ -0.34
SCN2BO60939 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SCN2BO60939 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SCN2BO60939 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SCN2BO60939 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.96□□□□□ -0.34
SCN2BO60939 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SCN2BO60939 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SCN2BO60939 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 PDXDC2P-206ENST00000534700 1315 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC12.95□□□□□ -0.34
SCN2BO60939 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.95□□□□□ -0.34
SCN2BO60939 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.95□□□□□ -0.34
SCN2BO60939 SSR4P1-201ENST00000415143 412 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.95□□□□□ -0.34
SCN2BO60939 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.95□□□□□ -0.34
SCN2BO60939 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.95□□□□□ -0.34
SCN2BO60939 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.95□□□□□ -0.34
SCN2BO60939 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.95□□□□□ -0.34
SCN2BO60939 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.95□□□□□ -0.34
SCN2BO60939 RN7SL774P-201ENST00000577467 290 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 RN7SL665P-201ENST00000578793 300 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 LINC01783-202ENST00000614408 828 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 BX284668.2-205ENST00000619677 828 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 AL031432.4-201ENST00000641729 2190 ntBASIC12.95□□□□□ -0.34
SCN2BO60939 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SCN2BO60939 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
SCN2BO60939 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SCN2BO60939 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SCN2BO60939 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.94□□□□□ -0.34
SCN2BO60939 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SCN2BO60939 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SCN2BO60939 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms