Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 AC015909.3-201ENST00000572855 1794 ntBASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 AC011481.3-201ENST00000623895 5594 ntBASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAF6Q9Y4K3 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TRAF6Q9Y4K3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 AC008764.8-201ENST00000623966 2717 ntBASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 BNIP3P42-201ENST00000454982 569 ntBASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 BNIP3P29-201ENST00000598302 571 ntBASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 AC011447.5-201ENST00000616168 564 ntBASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 LINC02228-202ENST00000641261 2489 ntBASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 PCDHB17P-202ENST00000623466 3066 ntBASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRAF6Q9Y4K3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 DNM1P41-201ENST00000623634 3350 ntBASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 AC015819.3-201ENST00000624305 2674 ntBASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 LINC00265-2P-201ENST00000413372 782 ntBASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 AC073869.2-201ENST00000417338 1026 ntBASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 PPP1R2P4-201ENST00000424051 595 ntBASIC13.32□□□□□ -0.28
TRAF6Q9Y4K3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms