Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC004554.1-201ENST00000422830 1468 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 CTAGE13P-201ENST00000416709 2446 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 MIR1202-201ENST00000408529 83 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 KLF2P1-201ENST00000447438 1042 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 HOMER2P2-201ENST00000451621 847 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC007551.1-201ENST00000457394 519 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 FTH1P14-201ENST00000482930 551 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AL160314.3-201ENST00000556041 767 ntBASIC11.13□□□□□ -0.63
RAB40CQ96S21 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
RAB40CQ96S21 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
RAB40CQ96S21 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC018629.1-201ENST00000623381 1736 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 AHCYP2-201ENST00000430630 1300 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 AC092123.2-201ENST00000611189 5421 ntBASIC11.12□□□□□ -0.63
RAB40CQ96S21 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
RAB40CQ96S21 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
RAB40CQ96S21 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms