Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
MMP13P45452 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 AL592076.1-201ENST00000424448 303 ntBASIC14.23□□□□□ -0.13
MMP13P45452 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.23□□□□□ -0.13
MMP13P45452 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 AC234782.1-201ENST00000451950 919 ntBASIC14.23□□□□□ -0.13
MMP13P45452 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.23□□□□□ -0.13
MMP13P45452 IMP3P2-201ENST00000489760 475 ntBASIC14.23□□□□□ -0.13
MMP13P45452 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.23□□□□□ -0.13
MMP13P45452 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
MMP13P45452 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MMP13P45452 AC132825.4-202ENST00000578792 434 ntBASIC14.23□□□□□ -0.13
MMP13P45452 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.23□□□□□ -0.13
MMP13P45452 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 Z98885.3-201ENST00000624882 1757 ntBASIC14.23□□□□□ -0.13
MMP13P45452 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MMP13P45452 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 AC018445.4-201ENST00000624066 2291 ntBASIC14.23□□□□□ -0.13
MMP13P45452 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.23□□□□□ -0.13
MMP13P45452 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MMP13P45452 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.23□□□□□ -0.13
MMP13P45452 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.22□□□□□ -0.13
MMP13P45452 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 AC124319.4-201ENST00000622931 2161 ntBASIC14.22□□□□□ -0.13
MMP13P45452 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MMP13P45452 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
MMP13P45452 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 RN7SL788P-201ENST00000460504 316 ntBASIC14.22□□□□□ -0.13
MMP13P45452 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 AC095040.1-201ENST00000513286 675 ntBASIC14.22□□□□□ -0.13
MMP13P45452 AC134698.3-201ENST00000523880 214 ntBASIC14.22□□□□□ -0.13
MMP13P45452 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.22□□□□□ -0.13
MMP13P45452 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
MMP13P45452 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.22□□□□□ -0.13
MMP13P45452 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 AL161773.1-201ENST00000624845 863 ntBASIC14.22□□□□□ -0.13
MMP13P45452 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 AC138761.6-201ENST00000583997 1423 ntBASIC14.22□□□□□ -0.13
MMP13P45452 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MMP13P45452 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.22□□□□□ -0.13
MMP13P45452 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MMP13P45452 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms