Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR3DP05423 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC16.33■□□□□ 0.2
POLR3DP05423 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.33■□□□□ 0.2
POLR3DP05423 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.33■□□□□ 0.2
POLR3DP05423 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR3DP05423 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR3DP05423 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
POLR3DP05423 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 AL672207.1-201ENST00000328462 1570 ntBASIC16.33■□□□□ 0.2
POLR3DP05423 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.33■□□□□ 0.2
POLR3DP05423 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
POLR3DP05423 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC16.33■□□□□ 0.2
POLR3DP05423 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
POLR3DP05423 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
POLR3DP05423 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR3DP05423 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR3DP05423 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 ASS1P2-201ENST00000439895 1223 ntBASIC16.32■□□□□ 0.2
POLR3DP05423 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR3DP05423 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.32■□□□□ 0.2
POLR3DP05423 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR3DP05423 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.32■□□□□ 0.2
POLR3DP05423 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
POLR3DP05423 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 AC099521.3-201ENST00000624251 2938 ntBASIC16.32■□□□□ 0.2
POLR3DP05423 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC16.32■□□□□ 0.2
POLR3DP05423 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
POLR3DP05423 PCDHA6-201ENST00000378126 3267 ntBASIC16.32■□□□□ 0.2
POLR3DP05423 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
POLR3DP05423 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR3DP05423 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
POLR3DP05423 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR3DP05423 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
POLR3DP05423 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR3DP05423 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
POLR3DP05423 AC245140.2-201ENST00000624054 1939 ntBASIC16.31■□□□□ 0.2
POLR3DP05423 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.31■□□□□ 0.2
POLR3DP05423 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
POLR3DP05423 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
POLR3DP05423 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
POLR3DP05423 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms