Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TCAF1P1-201ENST00000414990 2232 ntBASIC12.26□□□□□ -0.45
CNOT4O95628 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CNOT4O95628 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.26□□□□□ -0.45
CNOT4O95628 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.26□□□□□ -0.45
CNOT4O95628 PES1P2-201ENST00000449745 1735 ntBASIC12.25□□□□□ -0.45
CNOT4O95628 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 AC234644.1-201ENST00000406065 370 ntBASIC12.25□□□□□ -0.45
CNOT4O95628 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.25□□□□□ -0.45
CNOT4O95628 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.25□□□□□ -0.45
CNOT4O95628 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.25□□□□□ -0.45
CNOT4O95628 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.25□□□□□ -0.45
CNOT4O95628 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.25□□□□□ -0.45
CNOT4O95628 AC093300.1-201ENST00000510368 1201 ntBASIC12.25□□□□□ -0.45
CNOT4O95628 AC007952.4-201ENST00000573866 637 ntBASIC12.25□□□□□ -0.45
CNOT4O95628 MIR3940-201ENST00000579148 102 ntBASIC12.25□□□□□ -0.45
CNOT4O95628 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
CNOT4O95628 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.25□□□□□ -0.45
CNOT4O95628 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CNOT4O95628 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.25□□□□□ -0.45
CNOT4O95628 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CNOT4O95628 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.25□□□□□ -0.45
CNOT4O95628 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
CNOT4O95628 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 AC099521.3-201ENST00000624251 2938 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CNOT4O95628 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.24□□□□□ -0.45
CNOT4O95628 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 FMO6P-201ENST00000236166 1620 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CNOT4O95628 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 AC073210.1-201ENST00000414799 232 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 EEF1DP2-201ENST00000433698 843 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.24□□□□□ -0.45
CNOT4O95628 PPOX-204ENST00000462866 473 ntTSL 5 BASIC12.24□□□□□ -0.45
CNOT4O95628 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 AC068867.1-201ENST00000559855 150 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 RN7SL357P-201ENST00000581065 298 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
CNOT4O95628 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.24□□□□□ -0.45
CNOT4O95628 AL356740.1-201ENST00000602192 1297 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 AC011700.1-201ENST00000610409 2627 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CNOT4O95628 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.24□□□□□ -0.45
CNOT4O95628 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CNOT4O95628 AC138466.4-201ENST00000623965 852 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC12.24□□□□□ -0.45
CNOT4O95628 NRADDP-202ENST00000641269 1585 ntBASIC12.24□□□□□ -0.45
CNOT4O95628 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.24□□□□□ -0.45
CNOT4O95628 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CNOT4O95628 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms